About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s030.g0123.t1
Lsat_s030.g0124.t1
Lsat_s030.g0125.t1UNCHARACTERIZED
Lsat_s030.g0126.t1SODIUM/HYDROGEN EXCHANGER
Lsat_s030.g0127.t1TRANSCRIPTION INTERMEDIARY FACTOR
Lsat_s030.g0128.t1
Lsat_s030.g0129.t1PROTEIN B, PUTATIVE-RELATED-RELATED
Lsat_s030.g0130.t1
Lsat_s030.g0131.t1
Lsat_s030.g0132.t1OS06G0237300 PROTEIN
Lsat_s030.g0133.t1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Lsat_s030.g0134.t1CALCYPHOSIN
Lsat_s030.g0135.t1ATILLA, ISOFORM B-RELATED-RELATED
Lsat_s030.g0136.t1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25
Lsat_s030.g0137.t1OROTATE PHOSPHORIBOSYLTRANSFERASE
Lsat_s030.g0138.t1GLYCOSYLTRANSFERASE
Lsat_s030.g0139.t1MOLTING PROTEIN MLT-4
Lsat_s030.g0140.t1WD40 REPEAT PROTEIN
Lsat_s030.g0141.t1
Lsat_s030.g0142.t1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Lsat_s030.g0143.t1
Lsat_s030.g0144.t1RAB11-RELATED
Lsat_s030.g0145.t11,4-ALPHA-GLUCAN-BRANCHING ENZYME
Lsat_s030.g0146.t1
Lsat_s030.g0147.t1PROMININ PROM PROTEIN
Lsat_s030.g0148.t1-
Lsat_s030.g0149.t1PROMININ PROM PROTEIN
Lsat_s030.g0150.t1PROMININ PROM PROTEIN
Lsat_s030.g0151.t1
Lsat_s030.g0152.t1
Lsat_s030.g0153.t1
Lsat_s030.g0154.t1
Lsat_s030.g0155.t1
Lsat_s030.g0156.t1
Lsat_s030.g0157.t1
Lsat_s030.g0158.t1PROTEIN CBG06927
Lsat_s030.g0159.t1
Lsat_s030.g0160.t1COLLAGEN ALPHA
Lsat_s030.g0161.t1
Lsat_s030.g0162.t1
Lsat_s030.g0163.t1
Lsat_s030.g0164.t1
Lsat_s030.g0165.t1
Lsat_s030.g0166.t1
Lsat_s030.g0167.t1
Lsat_s030.g0168.t1
Lsat_s030.g0169.t1
Lsat_s030.g0170.t1
Lsat_s030.g0171.t1TOL-PAL SYSTEM PROTEIN TOLA
Lsat_s030.g0172.t1
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