About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s029.g0040.t1DEDICATOR OF CYTOKINESIS
Lsat_s029.g0041.t1
Lsat_s029.g0042.t1MYOTROPHIN
Lsat_s029.g0043.t1PROTEIN SERAC1
Lsat_s029.g0044.t1
Lsat_s029.g0045.t1GTP-BINDING PROTEIN ALPHA SUBUNIT
Lsat_s029.g0046.t1N-MYC DOWNSTREAM REGULATED
Lsat_s029.g0047.t1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 99
Lsat_s029.g0048.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s029.g0049.t1
Lsat_s029.g0050.t1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s029.g0051.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s029.g0052.t1
Lsat_s029.g0053.t1HOMEOBOX PROTEIN EMX-RELATED
Lsat_s029.g0054.t1SIDEROFLEXIN
Lsat_s029.g0055.t1SI:CH211-108C17.2-RELATED-RELATED
Lsat_s029.g0056.t1
Lsat_s029.g0057.t1HOMEOBOX PROTEIN EMX-RELATED
Lsat_s029.g0058.t1
Lsat_s029.g0059.t1HOMEOBOX PROTEIN EMX-RELATED
Lsat_s029.g0060.t1ACYLPYRUVASE
Lsat_s029.g0061.t1ANCIENT UBIQUITOUS PROTEIN
Lsat_s029.g0062.t1
Lsat_s029.g0063.t1
Lsat_s029.g0064.t1TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B
Lsat_s029.g0065.t1DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
Lsat_s029.g0066.t1
Lsat_s029.g0067.t1
Lsat_s029.g0068.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G
Lsat_s029.g0069.t1CENTROSOMAL PROTEIN OF 55 KDA
Lsat_s029.g0070.t1
Lsat_s029.g0071.t1
Lsat_s029.g0072.t1
Lsat_s029.g0073.t1
Lsat_s029.g0074.t1BADF TYPE ATPASE DOMAIN-CONTAINING PROTEIN
Lsat_s029.g0075.t14-NITROPHENYLPHOSPHATASE-RELATED
Lsat_s029.g0076.t1
Lsat_s029.g0077.t1
Lsat_s029.g0078.t1
Lsat_s029.g0079.t1TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN
Lsat_s029.g0080.t1UNCHARACTERIZED
Lsat_s029.g0081.t1
Lsat_s029.g0082.t1
Lsat_s029.g0083.t1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Lsat_s029.g0084.t1PHOSPHOACETYLGLUCOSAMINE MUTASE
Lsat_s029.g0085.t1BETA-1,4-GALACTOSYLTRANSFERASE
Lsat_s029.g0086.t1BTB/POZ DOMAIN-CONTAINING PROTEIN 16
Lsat_s029.g0087.t1
Lsat_s029.g0088.t1-
Lsat_s029.g0089.t1MAX DIMERIZATION, MAD
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