About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s028.g0091.t1
Lsat_s028.g0092.t1CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Lsat_s028.g0093.t1
Lsat_s028.g0094.t1TYROSINE-PROTEIN KINASE RECEPTOR
Lsat_s028.g0095.t1
Lsat_s028.g0096.t1TYROSINE-PROTEIN KINASE RECEPTOR
Lsat_s028.g0097.t1
Lsat_s028.g0098.t1SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
Lsat_s028.g0099.t1CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Lsat_s028.g0100.t1CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Lsat_s028.g0101.t1
Lsat_s028.g0102.t1CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Lsat_s028.g0103.t1
Lsat_s028.g0104.t1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Lsat_s028.g0105.t1ATP-BINDING TRANSPORT PROTEIN-RELATED
Lsat_s028.g0106.t1E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
Lsat_s028.g0107.t1TWISTER
Lsat_s028.g0108.t1N-ACETYLGALACTOSAMINYLTRANSFERASE
Lsat_s028.g0109.t1
Lsat_s028.g0110.t1
Lsat_s028.g0111.t1N-ACETYLGALACTOSAMINYLTRANSFERASE
Lsat_s028.g0112.t1
Lsat_s028.g0113.t1NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
Lsat_s028.g0114.t1
Lsat_s028.g0115.t1LEUCINE RICH REPEAT FAMILY PROTEIN
Lsat_s028.g0116.t1MULTIDRUG RESISTANCE PROTEIN
Lsat_s028.g0117.t1REPETIN
Lsat_s028.g0118.t1MULTIDRUG RESISTANCE PROTEIN
Lsat_s028.g0119.t1
Lsat_s028.g0120.t1
Lsat_s028.g0121.t1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR
Lsat_s028.g0122.t130S/40S RIBOSOMAL PROTEIN S3
Lsat_s028.g0123.t1CYSTEINE PROTEASE FAMILY C1-RELATED
Lsat_s028.g0124.t1
Lsat_s028.g0125.t1
Lsat_s028.g0126.t1
Lsat_s028.g0127.t1TOL-PAL SYSTEM PROTEIN TOLA
Lsat_s028.g0128.t1
Lsat_s028.g0129.t1
Lsat_s028.g0130.t1
Lsat_s028.g0131.t1
Lsat_s028.g0132.t1PATCHED-RELATED
Lsat_s028.g0133.t1ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY
Lsat_s028.g0134.t1DNAJ HOMOLOG SUBFAMILY A MEMBER 3, MITOCHONDRIAL
Lsat_s028.g0135.t1
Lsat_s028.g0136.t1GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN 1
Lsat_s028.g0137.t1
Lsat_s028.g0138.t1
Lsat_s028.g0139.t1
Lsat_s028.g0140.t1
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