Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s027.g0295.t1 | SPLICING FACTOR 3A SUBUNIT 2 |
Lsat_s027.g0296.t1 | TECTONIC FAMILY MEMBER |
Lsat_s027.g0297.t1 | |
Lsat_s027.g0298.t1 | THIAMINE PYROPHOSPHATE ENZYMES |
Lsat_s027.g0299.t1 | SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1 |
Lsat_s027.g0300.t1 | PR DOMAIN ZINC FINGER PROTEIN |
Lsat_s027.g0301.t1 | |
Lsat_s027.g0302.t1 | |
Lsat_s027.g0303.t1 | |
Lsat_s027.g0304.t1 | |
Lsat_s027.g0305.t1 | |
Lsat_s027.g0306.t1 | |
Lsat_s027.g0307.t1 | |
Lsat_s027.g0308.t1 | SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING |
Lsat_s027.g0309.t1 | RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 |
Lsat_s027.g0310.t1 | |
Lsat_s027.g0311.t1 | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED |
Lsat_s027.g0312.t1 | ADP RIBOSYLATION FACTOR-RELATED |
Lsat_s027.g0313.t1 | MYOTROPHIN |
Lsat_s027.g0314.t1 | RFX TRANSCRIPTION FACTOR FAMILY |
Lsat_s027.g0315.t1 | DNA-DIRECTED RNA POLYMERASE II, III |
Lsat_s027.g0316.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s027.g0317.t1 | |
Lsat_s027.g0318.t1 | |
Lsat_s027.g0319.t1 | RTDR1 |
Lsat_s027.g0320.t1 | SODIUM CHANNEL MODIFIER 1 |
Lsat_s027.g0321.t1 | GUANYLATE KINASE-RELATED |
Lsat_s027.g0322.t1 | TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP |
Lsat_s027.g0323.t1 | |
Lsat_s027.g0324.t1 | |
Lsat_s027.g0325.t1 | |
Lsat_s027.g0326.t1 | OBG GTPASE FAMILY |
Lsat_s027.g0327.t1 | GENE, 32742-RELATED-RELATED |
Lsat_s027.g0328.t1 | |
Lsat_s027.g0329.t1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Lsat_s027.g0330.t1 | CALCIUM BINDING PROTEINS |
Lsat_s027.g0331.t1 | |
Lsat_s027.g0332.t1 | ANION EXCHANGE PROTEIN |
Lsat_s027.g0333.t1 | RHOMBOID-RELATED PROTEIN |
Lsat_s027.g0334.t1 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
Lsat_s027.g0335.t1 | G-PROTEIN COUPLED RECEPTOR |
Lsat_s027.g0336.t1 | INNEXIN |
Lsat_s027.g0337.t1 | INNEXIN |
Lsat_s027.g0338.t1 | ENOS INTERACTING PROTEIN |
Lsat_s027.g0339.t1 | MICROTUBULE ASSOCIATED PROTEIN XMAP215 |
Lsat_s027.g0340.t1 | KREV INTERACTION TRAPPED 1-RELATED |
Lsat_s027.g0341.t1 | LIPID PHOSPHATE PHOSPHATASE |
Lsat_s027.g0342.t1 | LIPID PHOSPHATE PHOSPHATASE |
Lsat_s027.g0343.t1 | |
Lsat_s027.g0344.t1 | CS DOMAIN-CONTAINING PROTEIN |