About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s027.g0295.t1SPLICING FACTOR 3A SUBUNIT 2
Lsat_s027.g0296.t1TECTONIC FAMILY MEMBER
Lsat_s027.g0297.t1
Lsat_s027.g0298.t1THIAMINE PYROPHOSPHATE ENZYMES
Lsat_s027.g0299.t1SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
Lsat_s027.g0300.t1PR DOMAIN ZINC FINGER PROTEIN
Lsat_s027.g0301.t1
Lsat_s027.g0302.t1
Lsat_s027.g0303.t1
Lsat_s027.g0304.t1
Lsat_s027.g0305.t1
Lsat_s027.g0306.t1
Lsat_s027.g0307.t1
Lsat_s027.g0308.t1SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
Lsat_s027.g0309.t1RNA POLYMERASE-ASSOCIATED PROTEIN CTR9
Lsat_s027.g0310.t1
Lsat_s027.g0311.t1TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED
Lsat_s027.g0312.t1ADP RIBOSYLATION FACTOR-RELATED
Lsat_s027.g0313.t1MYOTROPHIN
Lsat_s027.g0314.t1RFX TRANSCRIPTION FACTOR FAMILY
Lsat_s027.g0315.t1DNA-DIRECTED RNA POLYMERASE II, III
Lsat_s027.g0316.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s027.g0317.t1
Lsat_s027.g0318.t1
Lsat_s027.g0319.t1RTDR1
Lsat_s027.g0320.t1SODIUM CHANNEL MODIFIER 1
Lsat_s027.g0321.t1GUANYLATE KINASE-RELATED
Lsat_s027.g0322.t1TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP
Lsat_s027.g0323.t1
Lsat_s027.g0324.t1
Lsat_s027.g0325.t1
Lsat_s027.g0326.t1OBG GTPASE FAMILY
Lsat_s027.g0327.t1GENE, 32742-RELATED-RELATED
Lsat_s027.g0328.t1
Lsat_s027.g0329.t1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Lsat_s027.g0330.t1CALCIUM BINDING PROTEINS
Lsat_s027.g0331.t1
Lsat_s027.g0332.t1ANION EXCHANGE PROTEIN
Lsat_s027.g0333.t1RHOMBOID-RELATED PROTEIN
Lsat_s027.g0334.t1N-ACETYLGALACTOSAMINYLTRANSFERASE
Lsat_s027.g0335.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s027.g0336.t1INNEXIN
Lsat_s027.g0337.t1INNEXIN
Lsat_s027.g0338.t1ENOS INTERACTING PROTEIN
Lsat_s027.g0339.t1MICROTUBULE ASSOCIATED PROTEIN XMAP215
Lsat_s027.g0340.t1KREV INTERACTION TRAPPED 1-RELATED
Lsat_s027.g0341.t1LIPID PHOSPHATE PHOSPHATASE
Lsat_s027.g0342.t1LIPID PHOSPHATE PHOSPHATASE
Lsat_s027.g0343.t1
Lsat_s027.g0344.t1CS DOMAIN-CONTAINING PROTEIN
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