Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s027.g0245.t1 | WNT RELATED |
Lsat_s027.g0246.t1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Lsat_s027.g0247.t1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Lsat_s027.g0248.t1 | |
Lsat_s027.g0249.t1 | OB FOLD NUCLEIC ACID BINDING PROTEIN-RELATED |
Lsat_s027.g0250.t1 | |
Lsat_s027.g0251.t1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Lsat_s027.g0252.t1 | |
Lsat_s027.g0253.t1 | NUCLEAR HORMONE RECEPTOR |
Lsat_s027.g0254.t1 | |
Lsat_s027.g0255.t1 | 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE |
Lsat_s027.g0256.t1 | |
Lsat_s027.g0257.t1 | 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED |
Lsat_s027.g0258.t1 | NONSYNDROMIC HEARING IMPAIRMENT PROTEIN |
Lsat_s027.g0259.t1 | BOMBESIN RECEPTOR-ACTIVATED PROTEIN C6ORF89 |
Lsat_s027.g0260.t1 | BOMBESIN RECEPTOR-ACTIVATED PROTEIN C6ORF89 |
Lsat_s027.g0261.t1 | ALDO/KETO REDUCTASE |
Lsat_s027.g0262.t1 | |
Lsat_s027.g0263.t1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED |
Lsat_s027.g0264.t1 | UNCHARACTERIZED |
Lsat_s027.g0265.t1 | TUMOR NECROSIS FACTOR RECEPTOR |
Lsat_s027.g0266.t1 | HISTONE-LYSINE N-METHYLTRANSFERASE SETD2 |
Lsat_s027.g0267.t1 | |
Lsat_s027.g0268.t1 | INOSITOL POLYPHOSPHATE KINASE |
Lsat_s027.g0269.t1 | PROTEIN CBG05131 |
Lsat_s027.g0270.t1 | |
Lsat_s027.g0271.t1 | DNA PRIMASE SMALL SUBUNIT |
Lsat_s027.g0272.t1 | |
Lsat_s027.g0273.t1 | TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED |
Lsat_s027.g0274.t1 | |
Lsat_s027.g0275.t1 | |
Lsat_s027.g0276.t1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN |
Lsat_s027.g0277.t1 | NUCLEOLAR PROTEIN OF 40 KDA |
Lsat_s027.g0278.t1 | RAN BINDING PROTEIN 9-RELATED |
Lsat_s027.g0279.t1 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
Lsat_s027.g0280.t1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED |
Lsat_s027.g0281.t1 | BILE ACID BETA-GLUCOSIDASE-RELATED |
Lsat_s027.g0282.t1 | MITOGEN-ACTIVATED PROTEIN KINASE |
Lsat_s027.g0283.t1 | HVA22-LIKE PROTEINS |
Lsat_s027.g0284.t1 | ARGININE OR CREATINE KINASE |
Lsat_s027.g0285.t1 | ARGININE OR CREATINE KINASE |
Lsat_s027.g0286.t1 | ARGININE OR CREATINE KINASE |
Lsat_s027.g0287.t1 | ARGININE OR CREATINE KINASE |
Lsat_s027.g0288.t1 | VILLIN |
Lsat_s027.g0289.t1 | |
Lsat_s027.g0290.t1 | |
Lsat_s027.g0291.t1 | |
Lsat_s027.g0292.t1 | SPERMATOGENESIS-ASSOCIATED SERINE-RICH PROTEIN 2-RELATED |
Lsat_s027.g0293.t1 | |
Lsat_s027.g0294.t1 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR AT 64C, ISOFORM A |