About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s026.g0317.t1MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1 MITOTIC ARREST DEFICIENT-LIKE PROTEIN 1
Lsat_s026.g0318.t1MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1 MITOTIC ARREST DEFICIENT-LIKE PROTEIN 1
Lsat_s026.g0319.t1
Lsat_s026.g0320.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 154
Lsat_s026.g0321.t1MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7
Lsat_s026.g0322.t1
Lsat_s027.g0001.t1
Lsat_s027.g0002.t1
Lsat_s027.g0003.t1FMRFAMIDE-RELATED PEPTIDES
Lsat_s027.g0004.t1
Lsat_s027.g0005.t1
Lsat_s027.g0006.t1
Lsat_s027.g0007.t1
Lsat_s027.g0008.t1
Lsat_s027.g0009.t1
Lsat_s027.g0010.t1
Lsat_s027.g0011.t1NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
Lsat_s027.g0012.t1SERINE/ARGININE RICH SPLICING FACTOR
Lsat_s027.g0013.t1SERINE/ARGININE RICH SPLICING FACTOR
Lsat_s027.g0014.t1SERINE/ARGININE RICH SPLICING FACTOR
Lsat_s027.g0015.t1SI:CH211-262H13.3-RELATED-RELATED
Lsat_s027.g0016.t1
Lsat_s027.g0017.t1MADF DOMAIN TRANSCRIPTION FACTOR
Lsat_s027.g0018.t1PROTEIN B, PUTATIVE-RELATED-RELATED
Lsat_s027.g0019.t1
Lsat_s027.g0020.t1
Lsat_s027.g0021.t1LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
Lsat_s027.g0022.t1TETRASPANIN
Lsat_s027.g0023.t1TETRASPANIN
Lsat_s027.g0024.t1TETRASPANIN
Lsat_s027.g0025.t1PROTEIN ARGININE N-METHYLTRANSFERASE
Lsat_s027.g0026.t1TETRASPANIN
Lsat_s027.g0027.t1WD REPEAT-CONTAINING PROTEIN 97
Lsat_s027.g0028.t1GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE
Lsat_s027.g0029.t1DNAJ HOMOLOG SUBFAMILY C MEMBER 22
Lsat_s027.g0030.t1RAS-RELATED PROTEIN RAB
Lsat_s027.g0031.t1JITTERBUG, ISOFORM N
Lsat_s027.g0032.t1UNCHARACTERIZED
Lsat_s027.g0033.t1IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX
Lsat_s027.g0034.t1THROMBOSPONDIN-TYPE LAMININ G DOMAIN AND EAR REPEAT-CONTAINING
Lsat_s027.g0035.t1MULTI-COPPER OXIDASE
Lsat_s027.g0036.t1MULTI-COPPER OXIDASE
Lsat_s027.g0037.t1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
Lsat_s027.g0038.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 103
Lsat_s027.g0039.t1CELL DIVISION CYCLE 16,23,27
Lsat_s027.g0040.t1ARMADILLO REPEAT-CONTAINING PROTEIN 4 ARMC4
Lsat_s027.g0041.t1
Lsat_s027.g0042.t1DNA TOPOISOMERASE/GYRASE
Lsat_s027.g0043.t1
Lsat_s027.g0044.t1
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