About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s026.g0117.t1G-PROTEIN COUPLED RECEPTOR TKR-1-RELATED
Lsat_s026.g0118.t1
Lsat_s026.g0119.t1
Lsat_s026.g0120.t1
Lsat_s026.g0121.t1
Lsat_s026.g0122.t1
Lsat_s026.g0123.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s026.g0124.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s026.g0125.t1
Lsat_s026.g0126.t1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s026.g0127.t1
Lsat_s026.g0128.t1NEGATIVE REGULATOR OF VESICLE FORMATION-RELATED
Lsat_s026.g0129.t1
Lsat_s026.g0130.t1NEGATIVE REGULATOR OF VESICLE FORMATION-RELATED
Lsat_s026.g0131.t1FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEIN
Lsat_s026.g0132.t1
Lsat_s026.g0133.t1
Lsat_s026.g0134.t1
Lsat_s026.g0135.t1PITUITARY HOMEOBOX HOMOLOG PTX1
Lsat_s026.g0136.t1E3 UBIQUITIN-PROTEIN LIGASE RAD18
Lsat_s026.g0137.t1
Lsat_s026.g0138.t1FERRITIN
Lsat_s026.g0139.t1
Lsat_s026.g0140.t1
Lsat_s026.g0141.t1
Lsat_s026.g0142.t1FERRITIN
Lsat_s026.g0143.t1ZCCHC10 PROTEIN
Lsat_s026.g0144.t1
Lsat_s026.g0145.t1CADHERIN-87A
Lsat_s026.g0146.t1BLUE CHEESE
Lsat_s026.g0147.t1
Lsat_s026.g0148.t1BLUE CHEESE
Lsat_s026.g0149.t1PROTEIN SIDEKICK
Lsat_s026.g0150.t1RNA-BINDING PROTEIN RELATED
Lsat_s026.g0151.t1DNA-DIRECTED RNA POLYMERASE
Lsat_s026.g0152.t1ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL
Lsat_s026.g0153.t1ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL
Lsat_s026.g0154.t1TATA ELEMENT MODULATORY FACTOR TMF1
Lsat_s026.g0155.t1E3 UBIQUITIN-PROTEIN LIGASE RING1 / RING 2 FAMILY MEMBER
Lsat_s026.g0156.t1ZINC FINGER PROTEIN
Lsat_s026.g0157.t1UBIQUITIN-CONJUGATING ENZYME E2
Lsat_s026.g0158.t1RAD50-INTERACTING PROTEIN 1 RINT-1
Lsat_s026.g0159.t1
Lsat_s026.g0160.t1
Lsat_s026.g0161.t1
Lsat_s026.g0162.t1
Lsat_s026.g0163.t1
Lsat_s026.g0164.t1
Lsat_s026.g0165.t1
Lsat_s026.g0166.t1
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