Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s026.g0017.t1 | |
| Lsat_s026.g0018.t1 | G-PROTEIN COUPLED RECEPTOR |
| Lsat_s026.g0019.t1 | |
| Lsat_s026.g0020.t1 | LEUCOKININ RECEPTOR-RELATED |
| Lsat_s026.g0021.t1 | TRANSMEMBRANE PROTEIN 180 |
| Lsat_s026.g0022.t1 | |
| Lsat_s026.g0023.t1 | LIPASE |
| Lsat_s026.g0024.t1 | TRANSMEMBRANE PROTEIN 180 |
| Lsat_s026.g0025.t1 | |
| Lsat_s026.g0026.t1 | |
| Lsat_s026.g0027.t1 | SPORE COAT PROTEIN SP85 |
| Lsat_s026.g0028.t1 | 60S RIBOSOMAL PROTEIN L18 |
| Lsat_s026.g0029.t1 | SPHINGOSINE KINASE |
| Lsat_s026.g0030.t1 | |
| Lsat_s026.g0031.t1 | SI:CH211-266K2.1 |
| Lsat_s026.g0032.t1 | HELICASE WITH DEATH DOMAIN-RELATED |
| Lsat_s026.g0033.t1 | |
| Lsat_s026.g0034.t1 | |
| Lsat_s026.g0035.t1 | |
| Lsat_s026.g0036.t1 | GLYCOPROTEIN HORMONE RECEPTOR |
| Lsat_s026.g0037.t1 | GLYCOPROTEIN HORMONE RECEPTOR |
| Lsat_s026.g0038.t1 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Lsat_s026.g0039.t1 | GLYCOPROTEIN HORMONE RECEPTOR |
| Lsat_s026.g0040.t1 | GLYCOPROTEIN HORMONE RECEPTOR |
| Lsat_s026.g0041.t1 | GLYCOPROTEIN HORMONE RECEPTOR |
| Lsat_s026.g0042.t1 | GLYCOPROTEIN HORMONE RECEPTOR |
| Lsat_s026.g0043.t1 | G-PROTEIN COUPLED RECEPTOR |
| Lsat_s026.g0044.t1 | |
| Lsat_s026.g0045.t1 | G-PROTEIN COUPLED RECEPTOR |
| Lsat_s026.g0046.t1 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Lsat_s026.g0047.t1 | G-PROTEIN COUPLED RECEPTOR |
| Lsat_s026.g0048.t1 | DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED |
| Lsat_s026.g0049.t1 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
| Lsat_s026.g0050.t1 | RIBOSOMAL PROTEIN L27 |
| Lsat_s026.g0051.t1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 20 |
| Lsat_s026.g0052.t1 | |
| Lsat_s026.g0053.t1 | |
| Lsat_s026.g0054.t1 | VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM |
| Lsat_s026.g0055.t1 | 26S PROTESOME SUBUNIT 6 |
| Lsat_s026.g0056.t1 | IFT140/172-RELATED |
| Lsat_s026.g0057.t1 | |
| Lsat_s026.g0058.t1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Lsat_s026.g0059.t1 | NOVEL ZZ TYPE ZINC FINGER DOMAIN CONTAINING PROTEIN |
| Lsat_s026.g0060.t1 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
| Lsat_s026.g0061.t1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Lsat_s026.g0062.t1 | NOVEL ZZ TYPE ZINC FINGER DOMAIN CONTAINING PROTEIN |
| Lsat_s026.g0063.t1 | |
| Lsat_s026.g0064.t1 | ATP SYNTHASE F CHAIN, MITOCHONDRIAL-RELATED |
| Lsat_s026.g0065.t1 | AMINO ACID TRANSPORTER |
| Lsat_s026.g0066.t1 | CENTROSOMAL PROTEIN OF 55 KDA |
