About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s025.g0169.t1F-BOX ONLY PROTEIN 48-RELATED
Lsat_s025.g0170.t1UNCHARACTERIZED
Lsat_s025.g0171.t1GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Lsat_s025.g0172.t1
Lsat_s025.g0173.t1UNCHARACTERIZED
Lsat_s025.g0174.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Lsat_s025.g0175.t1
Lsat_s025.g0176.t1GEO11419P1
Lsat_s025.g0177.t1PIKACHURIN-LIKE PROTEIN
Lsat_s025.g0178.t1
Lsat_s025.g0179.t1
Lsat_s025.g0180.t1
Lsat_s025.g0181.t1
Lsat_s025.g0182.t1
Lsat_s025.g0183.t1
Lsat_s025.g0184.t1
Lsat_s025.g0185.t1
Lsat_s025.g0186.t1CYCLIN
Lsat_s025.g0187.t1UNCHARACTERIZED
Lsat_s025.g0188.t1RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
Lsat_s025.g0189.t1LIPOCALIN-1 INTERACTING MEMBRANE RECEPTOR LIMR
Lsat_s025.g0190.t1SUGAR TRANSPORTER
Lsat_s025.g0191.t1
Lsat_s025.g0192.t1
Lsat_s025.g0193.t1
Lsat_s025.g0194.t1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s025.g0195.t1
Lsat_s025.g0196.t1
Lsat_s025.g0197.t1E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
Lsat_s025.g0198.t1
Lsat_s025.g0199.t1
Lsat_s025.g0200.t1
Lsat_s025.g0201.t1
Lsat_s025.g0202.t1
Lsat_s025.g0203.t1
Lsat_s025.g0204.t1SCLEROSTIN-RELATED
Lsat_s025.g0205.t1
Lsat_s025.g0206.t1HELICASE
Lsat_s025.g0207.t1ALTERNATIVE OXIDASE
Lsat_s025.g0208.t1CHARGED MULTIVESICULAR BODY PROTEIN
Lsat_s025.g0209.t1D-RIBITOL-5-PHOSPHATE CYTIDYLYLTRANSFERASE
Lsat_s025.g0210.t1
Lsat_s025.g0211.t1
Lsat_s025.g0212.t1
Lsat_s025.g0213.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
Lsat_s025.g0214.t160S RIBOSOMAL PROTEIN L19
Lsat_s025.g0215.t1PHOSPHOFRUCTOKINASE
Lsat_s025.g0216.t1
Lsat_s025.g0217.t1SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT
Lsat_s025.g0218.t1
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