About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s024.g0432.t1F-BOX ONLY PROTEIN 15
Lsat_s024.g0433.t1
Lsat_s024.g0434.t1
Lsat_s024.g0435.t1CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER
Lsat_s024.g0436.t1ELECTRON TRANSPORT PROTIN SCO1/SENC FAMILY MEMBER
Lsat_s024.g0437.t1
Lsat_s024.g0438.t1
Lsat_s024.g0439.t1PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
Lsat_s024.g0440.t1
Lsat_s024.g0441.t1-
Lsat_s024.g0442.t1N4BP1-RELATED
Lsat_s024.g0443.t1SOLUTE CARRIER FAMILY 35
Lsat_s024.g0444.t1NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
Lsat_s024.g0445.t1GLUTATHIONE SYNTHETASE
Lsat_s024.g0446.t1SPERIOLIN
Lsat_s024.g0447.t1
Lsat_s024.g0448.t1
Lsat_s024.g0449.t1CADHERIN-23
Lsat_s024.g0450.t1CYTOCHROME P450 FAMILY 3
Lsat_s024.g0451.t1
Lsat_s024.g0452.t1UNCHARACTERIZED
Lsat_s024.g0453.t1
Lsat_s024.g0454.t1
Lsat_s024.g0455.t1
Lsat_s024.g0456.t1RIKEN CDNA 6820408C15
Lsat_s024.g0457.t1CYTOCHROME C OXIDASE SUBUNIT IV
Lsat_s024.g0458.t1SYS1
Lsat_s024.g0459.t1VACUOLAR SORTING PROTEIN 35
Lsat_s024.g0460.t1
Lsat_s024.g0461.t1TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Lsat_s024.g0462.t1RABCONNECTIN-3B, ISOFORM A
Lsat_s024.g0463.t1ZINC FINGER PROTEIN
Lsat_s025.g0001.t1MUCIN 4-RELATED
Lsat_s025.g0002.t1
Lsat_s025.g0003.t1
Lsat_s025.g0004.t1
Lsat_s025.g0005.t1LD33804P
Lsat_s025.g0006.t1TRANSCRIPTION FACTOR E2F
Lsat_s025.g0007.t160S ACIDIC RIBOSOMAL PROTEIN P0
Lsat_s025.g0008.t1
Lsat_s025.g0009.t1ADENOSINE DEAMINASE
Lsat_s025.g0010.t1PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17
Lsat_s025.g0011.t1TRANSLATION FACTOR
Lsat_s025.g0012.t130S RIBOSOMAL PROTEIN S14
Lsat_s025.g0013.t1NUCLEOPORIN-LIKE PROTEIN 2
Lsat_s025.g0014.t1
Lsat_s025.g0015.t1
Lsat_s025.g0016.t1TIP120
Lsat_s025.g0017.t1
Lsat_s025.g0018.t1
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