About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s024.g0332.t1BACTERIOHEMERYTHRIN
Lsat_s024.g0333.t1
Lsat_s024.g0334.t1SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN
Lsat_s024.g0335.t1ZYX102 PROTEIN
Lsat_s024.g0336.t1UBIQUITIN
Lsat_s024.g0337.t1
Lsat_s024.g0338.t1
Lsat_s024.g0339.t1METALLOPEPTIDASE M28 FAMILY MEMBER
Lsat_s024.g0340.t1METALLOPEPTIDASE M28 FAMILY MEMBER
Lsat_s024.g0341.t1UNCHARACTERIZED
Lsat_s024.g0342.t1METALLOPEPTIDASE M28 FAMILY MEMBER
Lsat_s024.g0343.t1METALLOPEPTIDASE M28 FAMILY MEMBER
Lsat_s024.g0344.t1FANCONI ANEMIA GROUP A PROTEIN
Lsat_s024.g0345.t1PROTEIN CBG17025
Lsat_s024.g0346.t1FANCONI ANEMIA GROUP A PROTEIN
Lsat_s024.g0347.t1
Lsat_s024.g0348.t1TRANSCRIPTION FACTOR E2F
Lsat_s024.g0349.t1HL07962P-RELATED
Lsat_s024.g0350.t1
Lsat_s024.g0351.t1SERINE-THREONINE PROTEIN KINASE
Lsat_s024.g0352.t1PROTEIN DISPATCHED-RELATED
Lsat_s024.g0353.t1PROTEIN DISPATCHED-RELATED
Lsat_s024.g0354.t1PROTEIN DISPATCHED-RELATED
Lsat_s024.g0355.t1GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2
Lsat_s024.g0356.t1
Lsat_s024.g0357.t1
Lsat_s024.g0358.t1UPF0598 PROTEIN C8ORF82
Lsat_s024.g0359.t1DNA REPLICATION FACTOR CDT1
Lsat_s024.g0360.t1
Lsat_s024.g0361.t1RAB11-BINDING PROTEIN RELCH
Lsat_s024.g0362.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s024.g0363.t1RAB11-BINDING PROTEIN RELCH
Lsat_s024.g0364.t1THAP DOMAIN-CONTAINING PROTEIN 6
Lsat_s024.g0365.t1DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Lsat_s024.g0366.t1
Lsat_s024.g0367.t1DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4
Lsat_s024.g0368.t1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Lsat_s024.g0369.t1
Lsat_s024.g0370.t1ENZYMATIC POLYPROTEIN-RELATED
Lsat_s024.g0371.t1
Lsat_s024.g0372.t1
Lsat_s024.g0373.t1
Lsat_s024.g0374.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s024.g0375.t1
Lsat_s024.g0376.t1
Lsat_s024.g0377.t1PROTEIN CBG26694
Lsat_s024.g0378.t1
Lsat_s024.g0379.t1
Lsat_s024.g0380.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s024.g0381.t1
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