Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s024.g0332.t1 | BACTERIOHEMERYTHRIN |
Lsat_s024.g0333.t1 | |
Lsat_s024.g0334.t1 | SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN |
Lsat_s024.g0335.t1 | ZYX102 PROTEIN |
Lsat_s024.g0336.t1 | UBIQUITIN |
Lsat_s024.g0337.t1 | |
Lsat_s024.g0338.t1 | |
Lsat_s024.g0339.t1 | METALLOPEPTIDASE M28 FAMILY MEMBER |
Lsat_s024.g0340.t1 | METALLOPEPTIDASE M28 FAMILY MEMBER |
Lsat_s024.g0341.t1 | UNCHARACTERIZED |
Lsat_s024.g0342.t1 | METALLOPEPTIDASE M28 FAMILY MEMBER |
Lsat_s024.g0343.t1 | METALLOPEPTIDASE M28 FAMILY MEMBER |
Lsat_s024.g0344.t1 | FANCONI ANEMIA GROUP A PROTEIN |
Lsat_s024.g0345.t1 | PROTEIN CBG17025 |
Lsat_s024.g0346.t1 | FANCONI ANEMIA GROUP A PROTEIN |
Lsat_s024.g0347.t1 | |
Lsat_s024.g0348.t1 | TRANSCRIPTION FACTOR E2F |
Lsat_s024.g0349.t1 | HL07962P-RELATED |
Lsat_s024.g0350.t1 | |
Lsat_s024.g0351.t1 | SERINE-THREONINE PROTEIN KINASE |
Lsat_s024.g0352.t1 | PROTEIN DISPATCHED-RELATED |
Lsat_s024.g0353.t1 | PROTEIN DISPATCHED-RELATED |
Lsat_s024.g0354.t1 | PROTEIN DISPATCHED-RELATED |
Lsat_s024.g0355.t1 | GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 |
Lsat_s024.g0356.t1 | |
Lsat_s024.g0357.t1 | |
Lsat_s024.g0358.t1 | UPF0598 PROTEIN C8ORF82 |
Lsat_s024.g0359.t1 | DNA REPLICATION FACTOR CDT1 |
Lsat_s024.g0360.t1 | |
Lsat_s024.g0361.t1 | RAB11-BINDING PROTEIN RELCH |
Lsat_s024.g0362.t1 | FMRFAMIDE RECEPTOR-RELATED |
Lsat_s024.g0363.t1 | RAB11-BINDING PROTEIN RELCH |
Lsat_s024.g0364.t1 | THAP DOMAIN-CONTAINING PROTEIN 6 |
Lsat_s024.g0365.t1 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
Lsat_s024.g0366.t1 | |
Lsat_s024.g0367.t1 | DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4 |
Lsat_s024.g0368.t1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Lsat_s024.g0369.t1 | |
Lsat_s024.g0370.t1 | ENZYMATIC POLYPROTEIN-RELATED |
Lsat_s024.g0371.t1 | |
Lsat_s024.g0372.t1 | |
Lsat_s024.g0373.t1 | |
Lsat_s024.g0374.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s024.g0375.t1 | |
Lsat_s024.g0376.t1 | |
Lsat_s024.g0377.t1 | PROTEIN CBG26694 |
Lsat_s024.g0378.t1 | |
Lsat_s024.g0379.t1 | |
Lsat_s024.g0380.t1 | FMRFAMIDE RECEPTOR-RELATED |
Lsat_s024.g0381.t1 |