Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s024.g0082.t1 | |
Lsat_s024.g0083.t1 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
Lsat_s024.g0084.t1 | COPINE FAMILY PROTEIN 1 |
Lsat_s024.g0085.t1 | CLEAVAGE STIMULATION FACTOR SUBUNIT 1 |
Lsat_s024.g0086.t1 | SODIUM-GLUCOSE COTRANSPORTER REGULATORY PROTEIN -RELATED |
Lsat_s024.g0087.t1 | COPINE FAMILY PROTEIN 1 |
Lsat_s024.g0088.t1 | DULLARD PROTEIN PHOSPHATASE |
Lsat_s024.g0089.t1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
Lsat_s024.g0090.t1 | SCP160 |
Lsat_s024.g0091.t1 | FOLLISTATIN-RELATED |
Lsat_s024.g0092.t1 | CALSYNTENIN |
Lsat_s024.g0093.t1 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
Lsat_s024.g0094.t1 | PHOSPHATIDYLINOSITOL KINASE |
Lsat_s024.g0095.t1 | |
Lsat_s024.g0096.t1 | LD33804P |
Lsat_s024.g0097.t1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED |
Lsat_s024.g0098.t1 | FMRFAMIDE RECEPTOR-RELATED |
Lsat_s024.g0099.t1 | ANTIBIOTIC RESISTANCE PROTEIN MCBG |
Lsat_s024.g0100.t1 | CARBOHYDRATE SULFOTRANSFERASE |
Lsat_s024.g0101.t1 | THIOSULFATE SULFURTRANSFERASE RDL2, MITOCHONDRIAL-RELATED |
Lsat_s024.g0102.t1 | THIOSULFATE SULFURTRANSFERASE RDL2, MITOCHONDRIAL-RELATED |
Lsat_s024.g0103.t1 | THIOSULFATE SULFURTRANSFERASE RDL2, MITOCHONDRIAL-RELATED |
Lsat_s024.g0104.t1 | |
Lsat_s024.g0105.t1 | |
Lsat_s024.g0106.t1 | |
Lsat_s024.g0107.t1 | |
Lsat_s024.g0108.t1 | |
Lsat_s024.g0109.t1 | |
Lsat_s024.g0110.t1 | |
Lsat_s024.g0111.t1 | |
Lsat_s024.g0112.t1 | WAP FOUR-DISULFIDE CORE DOMAIN PROTEIN 1 |
Lsat_s024.g0113.t1 | BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE |
Lsat_s024.g0114.t1 | |
Lsat_s024.g0115.t1 | PROTEIN CBG26694 |
Lsat_s024.g0116.t1 | DNA TOPOISOMERASE I |
Lsat_s024.g0117.t1 | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2 |
Lsat_s024.g0118.t1 | CDC68 RELATED |
Lsat_s024.g0119.t1 | NUCLEAR HORMONE RECEPTOR |
Lsat_s024.g0120.t1 | AQUAPORIN TRANSPORTER |
Lsat_s024.g0121.t1 | PHOSPHORYLATED CTD INTERACTING FACTOR 1 |
Lsat_s024.g0122.t1 | ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7 |
Lsat_s024.g0123.t1 | METABOTROPIC GLUTAMATE RECEPTOR |
Lsat_s024.g0124.t1 | |
Lsat_s024.g0125.t1 | |
Lsat_s024.g0126.t1 | |
Lsat_s024.g0127.t1 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING |
Lsat_s024.g0128.t1 | |
Lsat_s024.g0129.t1 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
Lsat_s024.g0130.t1 | |
Lsat_s024.g0131.t1 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |