About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s024.g0082.t1
Lsat_s024.g0083.t1DNA REPAIR/RNA PROCESSING CPSF FAMILY
Lsat_s024.g0084.t1COPINE FAMILY PROTEIN 1
Lsat_s024.g0085.t1CLEAVAGE STIMULATION FACTOR SUBUNIT 1
Lsat_s024.g0086.t1SODIUM-GLUCOSE COTRANSPORTER REGULATORY PROTEIN -RELATED
Lsat_s024.g0087.t1COPINE FAMILY PROTEIN 1
Lsat_s024.g0088.t1DULLARD PROTEIN PHOSPHATASE
Lsat_s024.g0089.t1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Lsat_s024.g0090.t1SCP160
Lsat_s024.g0091.t1FOLLISTATIN-RELATED
Lsat_s024.g0092.t1CALSYNTENIN
Lsat_s024.g0093.t1SYNAPTIC ADHESION-LIKE MOLECULE SALM
Lsat_s024.g0094.t1PHOSPHATIDYLINOSITOL KINASE
Lsat_s024.g0095.t1
Lsat_s024.g0096.t1LD33804P
Lsat_s024.g0097.t1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
Lsat_s024.g0098.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s024.g0099.t1ANTIBIOTIC RESISTANCE PROTEIN MCBG
Lsat_s024.g0100.t1CARBOHYDRATE SULFOTRANSFERASE
Lsat_s024.g0101.t1THIOSULFATE SULFURTRANSFERASE RDL2, MITOCHONDRIAL-RELATED
Lsat_s024.g0102.t1THIOSULFATE SULFURTRANSFERASE RDL2, MITOCHONDRIAL-RELATED
Lsat_s024.g0103.t1THIOSULFATE SULFURTRANSFERASE RDL2, MITOCHONDRIAL-RELATED
Lsat_s024.g0104.t1
Lsat_s024.g0105.t1
Lsat_s024.g0106.t1
Lsat_s024.g0107.t1
Lsat_s024.g0108.t1
Lsat_s024.g0109.t1
Lsat_s024.g0110.t1
Lsat_s024.g0111.t1
Lsat_s024.g0112.t1WAP FOUR-DISULFIDE CORE DOMAIN PROTEIN 1
Lsat_s024.g0113.t1BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE
Lsat_s024.g0114.t1
Lsat_s024.g0115.t1PROTEIN CBG26694
Lsat_s024.g0116.t1DNA TOPOISOMERASE I
Lsat_s024.g0117.t1TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2
Lsat_s024.g0118.t1CDC68 RELATED
Lsat_s024.g0119.t1NUCLEAR HORMONE RECEPTOR
Lsat_s024.g0120.t1AQUAPORIN TRANSPORTER
Lsat_s024.g0121.t1PHOSPHORYLATED CTD INTERACTING FACTOR 1
Lsat_s024.g0122.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s024.g0123.t1METABOTROPIC GLUTAMATE RECEPTOR
Lsat_s024.g0124.t1
Lsat_s024.g0125.t1
Lsat_s024.g0126.t1
Lsat_s024.g0127.t1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Lsat_s024.g0128.t1
Lsat_s024.g0129.t1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Lsat_s024.g0130.t1
Lsat_s024.g0131.t1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
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