About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s023.g0256.t1
Lsat_s023.g0257.t1CHITINASE
Lsat_s023.g0258.t1SORTING NEXIN-8
Lsat_s023.g0259.t1
Lsat_s023.g0260.t1INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6
Lsat_s023.g0261.t1SCP160
Lsat_s023.g0262.t1
Lsat_s023.g0263.t1CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL
Lsat_s023.g0264.t1DNA-DIRECTED RNA POLYMERASE III
Lsat_s023.g0265.t1DNA-DIRECTED PRIMASE / POLYMERASE PROTEIN
Lsat_s023.g0266.t1SNARE PROTEINS
Lsat_s023.g0267.t1
Lsat_s023.g0268.t1ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN
Lsat_s023.g0269.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
Lsat_s023.g0270.t1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 31
Lsat_s023.g0271.t1
Lsat_s023.g0272.t1
Lsat_s023.g0273.t1COLLAGEN ALPHA
Lsat_s023.g0274.t1
Lsat_s023.g0275.t1
Lsat_s023.g0276.t1
Lsat_s023.g0277.t1
Lsat_s023.g0278.t1
Lsat_s023.g0279.t1
Lsat_s023.g0280.t1
Lsat_s023.g0281.t1
Lsat_s023.g0282.t1
Lsat_s023.g0283.t1
Lsat_s023.g0284.t1
Lsat_s023.g0285.t1
Lsat_s023.g0286.t1PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
Lsat_s023.g0287.t1
Lsat_s023.g0288.t1
Lsat_s023.g0289.t1
Lsat_s023.g0290.t1
Lsat_s023.g0291.t1
Lsat_s023.g0292.t1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Lsat_s023.g0293.t1AP-1 COMPLEX-ASSOCIATED REGULATORY PROTEIN
Lsat_s023.g0294.t1CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN
Lsat_s023.g0295.t1PROTEIN DOK-7
Lsat_s023.g0296.t1
Lsat_s023.g0297.t1EPITHELIAL MEMBRANE PROTEIN-RELATED
Lsat_s023.g0298.t1EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED
Lsat_s023.g0299.t1TESTIS-EXPRESSED PROTEIN 15
Lsat_s023.g0300.t1SERINE/THREONINE-PROTEIN KINASE NEK
Lsat_s023.g0301.t1BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE
Lsat_s023.g0302.t1MULTIPLE INOSITOL POLYPHOSPHATE PHOSPHATASE-RELATED
Lsat_s023.g0303.t1IKB KINASE
Lsat_s023.g0304.t1IKB KINASE
Lsat_s023.g0305.t1
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