About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s022.g0303.t1NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
Lsat_s022.g0304.t1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s022.g0305.t1RIKEN CDNA D130052B06 GENE
Lsat_s022.g0306.t1LORICRIN
Lsat_s022.g0307.t1
Lsat_s022.g0308.t1
Lsat_s022.g0309.t1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s022.g0310.t1
Lsat_s022.g0311.t1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s022.g0312.t1
Lsat_s022.g0313.t1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s022.g0314.t1
Lsat_s022.g0315.t1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s022.g0316.t1RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT
Lsat_s022.g0317.t1
Lsat_s022.g0318.t1
Lsat_s022.g0319.t1
Lsat_s022.g0320.t1
Lsat_s022.g0321.t1PHYTOENE DEHYDROGENASE
Lsat_s022.g0322.t1
Lsat_s022.g0323.t1
Lsat_s022.g0324.t1
Lsat_s022.g0325.t1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s022.g0326.t1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s022.g0327.t1UNCHARACTERIZED
Lsat_s022.g0328.t1UNCHARACTERIZED
Lsat_s022.g0329.t1
Lsat_s022.g0330.t1
Lsat_s022.g0331.t1
Lsat_s022.g0332.t1-
Lsat_s022.g0333.t1RIBOSE-5-PHOSPHATE ISOMERASE
Lsat_s022.g0334.t1DIHYDRODIPICOLINATE SYNTHASE
Lsat_s022.g0335.t1DDB1- AND CUL4-ASSOCIATED FACTOR 10
Lsat_s022.g0336.t1AGAP008228-PA
Lsat_s022.g0337.t1
Lsat_s022.g0338.t1DYNACTIN 1-RELATED MICROTUBULE-BINDING
Lsat_s022.g0339.t1
Lsat_s022.g0340.t1FATTY ACID SYNTHASE
Lsat_s022.g0341.t1
Lsat_s022.g0342.t1
Lsat_s022.g0343.t1
Lsat_s022.g0344.t1
Lsat_s022.g0345.t1FATTY ACID SYNTHASE
Lsat_s022.g0346.t1
Lsat_s022.g0347.t1FATTY ACID SYNTHASE
Lsat_s023.g0001.t1VACUOLAR PROTEIN SORTING 54
Lsat_s023.g0002.t1
Lsat_s023.g0003.t1-
Lsat_s023.g0004.t1-
Lsat_s023.g0005.t1TRANSMEMBRANE PROTEIN 260
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