About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s022.g0003.t1SMC5-SMC6 COMPLEX LOCALIZATION FACTOR 2
Lsat_s022.g0004.t1
Lsat_s022.g0005.t1METAL TRANSPORTER CNNM
Lsat_s022.g0006.t1UNCHARACTERIZED
Lsat_s022.g0007.t1BIORIENTATION OF CHROMOSOMES IN CELL DIVISION 1 LIKE 1
Lsat_s022.g0008.t1
Lsat_s022.g0009.t1ACTIN
Lsat_s022.g0010.t1SUPPRESSOR OF FUSED
Lsat_s022.g0011.t1
Lsat_s022.g0012.t1MITOFERRIN-1-RELATED
Lsat_s022.g0013.t1CALCIUM BINDING PROTEIN
Lsat_s022.g0014.t1FLAVIN MONOAMINE OXIDASE
Lsat_s022.g0015.t1HEAT SHOCK TRANSCRIPTION FACTOR
Lsat_s022.g0016.t1
Lsat_s022.g0017.t1
Lsat_s022.g0018.t1POTASSIUM CHANNEL, SUBFAMILY K
Lsat_s022.g0019.t1POTASSIUM CHANNEL, SUBFAMILY K
Lsat_s022.g0020.t1PROTEIN DIAPHANOUS
Lsat_s022.g0021.t1POTASSIUM CHANNEL, SUBFAMILY K
Lsat_s022.g0022.t1SH2 DOMAIN CONTAINING PROTEIN
Lsat_s022.g0023.t1SH2 DOMAIN CONTAINING PROTEIN
Lsat_s022.g0024.t1SH2 DOMAIN CONTAINING PROTEIN
Lsat_s022.g0025.t1SH2 DOMAIN CONTAINING PROTEIN
Lsat_s022.g0026.t1ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4
Lsat_s022.g0027.t1F-BOX ONLY PROTEIN 33
Lsat_s022.g0028.t1TRANSFERRIN
Lsat_s022.g0029.t1
Lsat_s022.g0030.t1
Lsat_s022.g0031.t1
Lsat_s022.g0032.t1MUCIN
Lsat_s022.g0033.t1
Lsat_s022.g0034.t1MRNA EXPORT FACTOR AND BUB3
Lsat_s022.g0035.t130S RIBOSOMAL PROTEIN S18
Lsat_s022.g0036.t1DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED
Lsat_s022.g0037.t1ES1 PROTEIN HOMOLOG, MITOCHONDRIAL
Lsat_s022.g0038.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 189
Lsat_s022.g0039.t1
Lsat_s022.g0040.t1
Lsat_s022.g0041.t1
Lsat_s022.g0042.t1
Lsat_s022.g0043.t1
Lsat_s022.g0044.t1
Lsat_s022.g0045.t1NUCLEAR HORMONE RECEPTOR HR3-RELATED
Lsat_s022.g0046.t1
Lsat_s022.g0047.t1
Lsat_s022.g0048.t1SH3 MULTIPLE DOMAIN
Lsat_s022.g0049.t1
Lsat_s022.g0050.t1
Lsat_s022.g0051.t1HOMEOBOX PROTEIN NKX
Lsat_s022.g0052.t1
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