About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s021.g0173.t1SODIUM/DICARBOXYLATE SYMPORTER-RELATED
Lsat_s021.g0174.t1CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR
Lsat_s021.g0175.t1POLYCOMB PROTEIN
Lsat_s021.g0176.t1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
Lsat_s021.g0177.t1UNCHARACTERIZED
Lsat_s021.g0178.t1N4BP1-RELATED
Lsat_s021.g0179.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s021.g0180.t1
Lsat_s021.g0181.t1
Lsat_s021.g0182.t1CHAPERONIN
Lsat_s021.g0183.t1MACOILIN
Lsat_s021.g0184.t1RIBOSOMAL PROTEIN S6 KINASE
Lsat_s021.g0185.t1GH16255P
Lsat_s021.g0186.t1REACTIVE OXYGEN SPECIES MODULATOR 1
Lsat_s021.g0187.t1
Lsat_s021.g0188.t1FATTY ACID DESATURASE 2
Lsat_s021.g0189.t1L-2-HYDROXYCARBOXYLATE DEHYDROGENASE (NAD(P)(+))
Lsat_s021.g0190.t1L-2-HYDROXYCARBOXYLATE DEHYDROGENASE (NAD(P)(+))
Lsat_s021.g0191.t1
Lsat_s021.g0192.t1RNA-BINDING MOTIF PROTEIN 14B
Lsat_s021.g0193.t1
Lsat_s021.g0194.t1
Lsat_s021.g0195.t1
Lsat_s021.g0196.t1
Lsat_s021.g0197.t1
Lsat_s021.g0198.t1
Lsat_s021.g0199.t1
Lsat_s021.g0200.t1
Lsat_s021.g0201.t1
Lsat_s021.g0202.t1CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN
Lsat_s021.g0203.t1IRE1-RELATED
Lsat_s021.g0204.t1SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3
Lsat_s021.g0205.t1
Lsat_s021.g0206.t1
Lsat_s021.g0207.t1-
Lsat_s021.g0208.t1
Lsat_s021.g0209.t1
Lsat_s021.g0210.t1
Lsat_s021.g0211.t1
Lsat_s021.g0212.t1CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN
Lsat_s021.g0213.t1
Lsat_s021.g0214.t1EGF-LIKE-DOMAIN, MULTIPLE 7, 8
Lsat_s021.g0215.t13-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN
Lsat_s021.g0216.t1PHOSPHOLIPASE D
Lsat_s021.g0217.t1NUCLEAR PORE COMPLEX PROTEIN NUP205
Lsat_s021.g0218.t1NAD DEPENDENT EPIMERASE/DEHYDRATASE
Lsat_s021.g0219.t1
Lsat_s021.g0220.t1T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
Lsat_s021.g0221.t1TANDEM PH DOMAIN CONTAINING PROTEIN
Lsat_s021.g0222.t1SWAP-70 RECOMBINASE
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