About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s021.g0223.t1SWAP-70 RECOMBINASE
Lsat_s021.g0224.t1AFADIN
Lsat_s021.g0225.t1INTRAFLAGELLAR TRANSPORT PROTEIN 88 HOMOLOG
Lsat_s021.g0226.t1XAA-PRO AMINOPEPTIDASE 1
Lsat_s021.g0227.t1GUANYL-NUCLEOTIDE EXCHANGE FACTOR
Lsat_s021.g0228.t1RUNT RELATED
Lsat_s021.g0229.t1
Lsat_s021.g0230.t1TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED
Lsat_s021.g0231.t1GI:13385330
Lsat_s021.g0232.t1NUCLEOPORIN NUP37 P37 -RELATED
Lsat_s021.g0233.t1RIBOSOMAL PROTEIN L23-RELATED
Lsat_s021.g0234.t1
Lsat_s021.g0235.t1
Lsat_s021.g0236.t1BCL-2-LIKE PROTEIN 13
Lsat_s021.g0237.t1ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED
Lsat_s021.g0238.t1MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED
Lsat_s021.g0239.t1RNA PROCESSING PROTEIN LD23810P
Lsat_s021.g0240.t1ENDO-ALPHA-1,2-MANNOSIDASE
Lsat_s021.g0241.t1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Lsat_s021.g0242.t1PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER
Lsat_s021.g0243.t1CYTOKINE RECEPTOR
Lsat_s021.g0244.t1
Lsat_s021.g0245.t1
Lsat_s021.g0246.t1CYTOKINE RECEPTOR
Lsat_s021.g0247.t1EPM2A-INTERACTING PROTEIN 1
Lsat_s021.g0248.t1
Lsat_s021.g0249.t1
Lsat_s021.g0250.t1
Lsat_s021.g0251.t1
Lsat_s021.g0252.t1CYTOKINE RECEPTOR
Lsat_s021.g0253.t1SER/THR-RICH PROTEIN T10 IN DGCR REGION
Lsat_s021.g0254.t1SER/THR-RICH PROTEIN T10 IN DGCR REGION
Lsat_s021.g0255.t1SERINE PROTEASE INHIBITOR, SERPIN
Lsat_s021.g0256.t1
Lsat_s021.g0257.t1SERINE PROTEASE INHIBITOR, SERPIN
Lsat_s021.g0258.t1SERINE PROTEASE INHIBITOR, SERPIN
Lsat_s021.g0259.t1CADHERIN-87A
Lsat_s021.g0260.t1
Lsat_s021.g0261.t1DUF614 FAMILY PROTEIN-RELATED
Lsat_s021.g0262.t1BETA-1,4-GALACTOSYLTRANSFERASE
Lsat_s021.g0263.t1CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1
Lsat_s021.g0264.t1BTK-BINDING PROTEIN-RELATED
Lsat_s021.g0265.t1STYLE CELL-CYCLE INHIBITOR 1
Lsat_s021.g0266.t1OLIGORIBONUCLEASE, MITOCHONDRIAL
Lsat_s021.g0267.t15'-NUCLEOTIDASE DOMAIN-CONTAINING
Lsat_s021.g0268.t1
Lsat_s021.g0269.t1INHIBITOR OF APOPTOSIS
Lsat_s021.g0270.t1
Lsat_s021.g0271.t1INHIBITOR OF APOPTOSIS
Lsat_s021.g0272.t1
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