About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s021.g0123.t1
Lsat_s021.g0124.t1
Lsat_s021.g0125.t1-
Lsat_s021.g0126.t1
Lsat_s021.g0127.t1POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY KQT MEMBER 4
Lsat_s021.g0128.t1
Lsat_s021.g0129.t1
Lsat_s021.g0130.t1CARNITINE O-ACYLTRANSFERASE
Lsat_s021.g0131.t1CARNITINE O-ACYLTRANSFERASE
Lsat_s021.g0132.t1NERVE GROWTH FACTOR NGF -RELATED
Lsat_s021.g0133.t1
Lsat_s021.g0134.t1
Lsat_s021.g0135.t1DUF3504 DOMAIN-CONTAINING PROTEIN
Lsat_s021.g0136.t1TRANSPOSASE-RELATED
Lsat_s021.g0137.t1TAXILIN
Lsat_s021.g0138.t1LP04239P
Lsat_s021.g0139.t1NADPH OXIDASE
Lsat_s021.g0140.t1FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
Lsat_s021.g0141.t1
Lsat_s021.g0142.t1AROMATIC AMINO ACID HYDROXYLASE
Lsat_s021.g0143.t1SLEI FAMILY PROTEIN
Lsat_s021.g0144.t1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Lsat_s021.g0145.t1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Lsat_s021.g0146.t1CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B
Lsat_s021.g0147.t1RE42071P
Lsat_s021.g0148.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s021.g0149.t1
Lsat_s021.g0150.t1-
Lsat_s021.g0151.t1
Lsat_s021.g0152.t1
Lsat_s021.g0153.t1
Lsat_s021.g0154.t1
Lsat_s021.g0155.t1
Lsat_s021.g0156.t1SODIUM/DICARBOXYLATE SYMPORTER-RELATED
Lsat_s021.g0157.t1
Lsat_s021.g0158.t1EPITHELIAL CELL-TRANSFORMING SEQUENCE 2 ONCOGENE-LIKE
Lsat_s021.g0159.t1
Lsat_s021.g0160.t1P53 REGULATED PA26 NUCLEAR PROTEIN SESTRIN
Lsat_s021.g0161.t1
Lsat_s021.g0162.t1
Lsat_s021.g0163.t1
Lsat_s021.g0164.t1BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
Lsat_s021.g0165.t1
Lsat_s021.g0166.t1
Lsat_s021.g0167.t1RYANODINE RECEPTOR AND IP3 RECEPTOR
Lsat_s021.g0168.t1TYROSINE-PROTEIN KINASE RECEPTOR
Lsat_s021.g0169.t1
Lsat_s021.g0170.t1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Lsat_s021.g0171.t1GOLGI-ASSOCIATED PDZ AND COILED-COIL MOTIF-CONTAINING
Lsat_s021.g0172.t1OVOCHYMASE-RELATED
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