About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s020.g0333.t1OS10G0105400 PROTEIN
Lsat_s020.g0334.t1OS10G0105400 PROTEIN
Lsat_s020.g0335.t1
Lsat_s020.g0336.t1OS10G0105400 PROTEIN
Lsat_s020.g0337.t1STANNIOCALCIN
Lsat_s020.g0338.t1OS10G0105400 PROTEIN
Lsat_s020.g0339.t1
Lsat_s020.g0340.t1OS10G0105400 PROTEIN
Lsat_s020.g0341.t1OS10G0105400 PROTEIN
Lsat_s020.g0342.t1OS10G0105400 PROTEIN
Lsat_s020.g0343.t1OS10G0105400 PROTEIN
Lsat_s020.g0344.t1OS10G0105400 PROTEIN
Lsat_s020.g0345.t1
Lsat_s020.g0346.t1OS10G0105400 PROTEIN
Lsat_s020.g0347.t1
Lsat_s020.g0348.t1
Lsat_s020.g0349.t1
Lsat_s020.g0350.t1
Lsat_s020.g0351.t1RGD1565685 PROTEIN
Lsat_s020.g0352.t1UNCHARACTERIZED
Lsat_s020.g0353.t1
Lsat_s020.g0354.t1
Lsat_s020.g0355.t1
Lsat_s020.g0356.t1
Lsat_s020.g0357.t1-
Lsat_s020.g0358.t1
Lsat_s020.g0359.t1
Lsat_s020.g0360.t1CYTOKINE RECEPTOR
Lsat_s021.g0001.t1UNCHARACTERIZED
Lsat_s021.g0002.t1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Lsat_s021.g0003.t1AMINO ACID TRANSPORTER
Lsat_s021.g0004.t1
Lsat_s021.g0005.t1
Lsat_s021.g0006.t1AMINO ACID TRANSPORTER
Lsat_s021.g0007.t1PEROXISOMAL TARGETING SIGNAL 2 RECEPTOR
Lsat_s021.g0008.t1DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2
Lsat_s021.g0009.t1DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2
Lsat_s021.g0010.t1SHIPPO-1-RELATED
Lsat_s021.g0011.t1SHIPPO-1-RELATED
Lsat_s021.g0012.t1
Lsat_s021.g0013.t1NEL HOMOLOG
Lsat_s021.g0014.t1-
Lsat_s021.g0015.t1
Lsat_s021.g0016.t1
Lsat_s021.g0017.t1EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP
Lsat_s021.g0018.t1
Lsat_s021.g0019.t1
Lsat_s021.g0020.t1
Lsat_s021.g0021.t1
Lsat_s021.g0022.t1
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