About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s020.g0083.t1
Lsat_s020.g0084.t1OS10G0105400 PROTEIN
Lsat_s020.g0085.t1STANNIOCALCIN
Lsat_s020.g0086.t1OS10G0105400 PROTEIN
Lsat_s020.g0087.t1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15
Lsat_s020.g0088.t1
Lsat_s020.g0089.t1
Lsat_s020.g0090.t1MATRIX METALLOPROTEINASE
Lsat_s020.g0091.t1BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA
Lsat_s020.g0092.t1NEUROLIGIN
Lsat_s020.g0093.t1ASPARTATE BETA-HYDROXYLASE DOMAIN-CONTAINING PROTEIN 2
Lsat_s020.g0094.t1
Lsat_s020.g0095.t1
Lsat_s020.g0096.t1
Lsat_s020.g0097.t1
Lsat_s020.g0098.t1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Lsat_s020.g0099.t1
Lsat_s020.g0100.t1MITOTIC-SPINDLE ORGANIZING PROTEIN 2A-RELATED
Lsat_s020.g0101.t1CUE DOMAIN CONTAINING PROTEIN 1
Lsat_s020.g0102.t139A RIBOSOMAL PROTEIN L50, MITOCHONDRIAL
Lsat_s020.g0103.t1AP1 GAMMA SUBUNIT BINDING PROTEIN 1
Lsat_s020.g0104.t1
Lsat_s020.g0105.t1GLYCOSYLTRANSFERASE 14 FAMILY MEMBER
Lsat_s020.g0106.t1RNA POLYMERASE II HOLOENZYME COMPONENT SRB7
Lsat_s020.g0107.t160S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER
Lsat_s020.g0108.t1RIBOSOME MATURATION PROTEIN SBDS
Lsat_s020.g0109.t1LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1
Lsat_s020.g0110.t1COLIPASE
Lsat_s020.g0111.t1
Lsat_s020.g0112.t1
Lsat_s020.g0113.t1COLIPASE
Lsat_s020.g0114.t1
Lsat_s020.g0115.t1G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE
Lsat_s020.g0116.t1
Lsat_s020.g0117.t1ZGC:194242
Lsat_s020.g0118.t1
Lsat_s020.g0119.t1
Lsat_s020.g0120.t1UBIQUITIN-ASSOCIATED AND SH3 DOMAIN-CONTAINING BA-RELATED
Lsat_s020.g0121.t1DUAL SPECIFICITY PROTEIN PHOSPHATASE
Lsat_s020.g0122.t1SET AND MYND DOMAIN-CONTAINING PROTEIN 4
Lsat_s020.g0123.t1UNCHARACTERIZED
Lsat_s020.g0124.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 117
Lsat_s020.g0125.t1
Lsat_s020.g0126.t1MORN REPEAT-CONTAINING PROTEIN 3
Lsat_s020.g0127.t1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31
Lsat_s020.g0128.t1RE45066P-RELATED
Lsat_s020.g0129.t1RE45066P-RELATED
Lsat_s020.g0130.t1
Lsat_s020.g0131.t1
Lsat_s020.g0132.t1LEISHMANOLYSIN-LIKE PEPTIDASE
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