About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s019.g0432.t1
Lsat_s019.g0433.t1HOMEOBOX PROTEIN SIX
Lsat_s019.g0434.t1
Lsat_s019.g0435.t1
Lsat_s019.g0436.t1
Lsat_s019.g0437.t1
Lsat_s019.g0438.t1
Lsat_s019.g0439.t1
Lsat_s019.g0440.t1
Lsat_s019.g0441.t1
Lsat_s019.g0442.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s019.g0443.t1
Lsat_s019.g0444.t1
Lsat_s019.g0445.t1
Lsat_s019.g0446.t1
Lsat_s019.g0447.t1
Lsat_s019.g0448.t1HOMEOBOX PROTEIN SIX
Lsat_s019.g0449.t1
Lsat_s019.g0450.t1
Lsat_s019.g0451.t1
Lsat_s019.g0452.t1
Lsat_s019.g0453.t1
Lsat_s019.g0454.t1
Lsat_s019.g0455.t1
Lsat_s019.g0456.t1
Lsat_s019.g0457.t1
Lsat_s019.g0458.t1
Lsat_s019.g0459.t1HISTIDINE-RICH CALCIUM-BINDING PROTEIN-RELATED
Lsat_s019.g0460.t1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s019.g0461.t1THYROTROPH EMBRYONIC FACTOR RELATED
Lsat_s019.g0462.t1
Lsat_s019.g0463.t1CELL GROWTH REGULATOR WITH RING FINGER DOMAIN PROTEIN 1
Lsat_s019.g0464.t1CLASP
Lsat_s019.g0465.t1
Lsat_s019.g0466.t1
Lsat_s019.g0467.t1
Lsat_s019.g0468.t1PROTEIN FAM181B
Lsat_s019.g0469.t1
Lsat_s019.g0470.t1
Lsat_s019.g0471.t1THIOREDOXIN DOMAIN-CONTAINING PROTEIN 16
Lsat_s019.g0472.t1MYOTONIC DYSTROPHY S/T KINASE-RELATED
Lsat_s019.g0473.t1
Lsat_s019.g0474.t1SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B
Lsat_s019.g0475.t1GUANYLATE BINDING PROTEIN
Lsat_s019.g0476.t1REST COREPRESSOR COREST PROTEIN-RELATED
Lsat_s019.g0477.t1
Lsat_s019.g0478.t1NISCHARIN RELATED
Lsat_s019.g0479.t1MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S10
Lsat_s019.g0480.t1
Lsat_s019.g0481.t1
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