About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s020.g0033.t1
Lsat_s020.g0034.t1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Lsat_s020.g0035.t1AGAP012002-PA
Lsat_s020.g0036.t1AGAP012002-PA
Lsat_s020.g0037.t1
Lsat_s020.g0038.t1
Lsat_s020.g0039.t1FI19613P1
Lsat_s020.g0040.t1PROTEIN CBG16428
Lsat_s020.g0041.t1
Lsat_s020.g0042.t1FI19613P1
Lsat_s020.g0043.t1
Lsat_s020.g0044.t1RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
Lsat_s020.g0045.t1
Lsat_s020.g0046.t1PROTEIN CBG12474
Lsat_s020.g0047.t1
Lsat_s020.g0048.t1
Lsat_s020.g0049.t1
Lsat_s020.g0050.t1PROTEIN CBG12474
Lsat_s020.g0051.t1CHITIN BINDING PERITROPHIN-A
Lsat_s020.g0052.t1
Lsat_s020.g0053.t1CHITIN BINDING PERITROPHIN-A
Lsat_s020.g0054.t1
Lsat_s020.g0055.t1NEPHRIN
Lsat_s020.g0056.t1MULTI-COPPER OXIDASE
Lsat_s020.g0057.t1MULTI-COPPER OXIDASE
Lsat_s020.g0058.t1MULTI-COPPER OXIDASE
Lsat_s020.g0059.t1MULTI-COPPER OXIDASE
Lsat_s020.g0060.t1MULTI-COPPER OXIDASE
Lsat_s020.g0061.t1
Lsat_s020.g0062.t1
Lsat_s020.g0063.t1NEPHRIN
Lsat_s020.g0064.t1
Lsat_s020.g0065.t1
Lsat_s020.g0066.t1GLYCOSYLTRANSFERASE 14 FAMILY MEMBER
Lsat_s020.g0067.t1RING FINGER PROTEIN-RELATED
Lsat_s020.g0068.t1
Lsat_s020.g0069.t1RING FINGER PROTEIN-RELATED
Lsat_s020.g0070.t1UNCHARACTERIZED
Lsat_s020.g0071.t1S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE
Lsat_s020.g0072.t1
Lsat_s020.g0073.t1DEK PROTEIN
Lsat_s020.g0074.t1PALMITOYLTRANSFERASE
Lsat_s020.g0075.t1OS10G0105400 PROTEIN
Lsat_s020.g0076.t1STANNIOCALCIN
Lsat_s020.g0077.t1OS10G0105400 PROTEIN
Lsat_s020.g0078.t1OS10G0105400 PROTEIN
Lsat_s020.g0079.t1PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Lsat_s020.g0080.t1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13
Lsat_s020.g0081.t1ANTIGEN MLAA-22-RELATED
Lsat_s020.g0082.t1
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