About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s019.g0332.t126S PROTEASOME REGULATORY SUBUNIT
Lsat_s019.g0333.t1MITOCHONDRIAL GENOME MAINTENANCE EXONUCLEASE 1
Lsat_s019.g0334.t1
Lsat_s019.g0335.t1
Lsat_s019.g0336.t1CYSTEINE-RICH MOTOR NEURON 1 PROTEIN
Lsat_s019.g0337.t1UNCHARACTERIZED
Lsat_s019.g0338.t1GH04784P
Lsat_s019.g0339.t1WD REPEAT-CONTAINING PROTEIN 27
Lsat_s019.g0340.t1KATNB1-LIKE PROTEIN 1
Lsat_s019.g0341.t1VISUAL SYSTEM HOMEOBOX 2
Lsat_s019.g0342.t1
Lsat_s019.g0343.t1
Lsat_s019.g0344.t1
Lsat_s019.g0345.t1VISUAL SYSTEM HOMEOBOX 2
Lsat_s019.g0346.t1PROTEIN HAPLESS 2
Lsat_s019.g0347.t1ZGC:174356
Lsat_s019.g0348.t1ZGC:174356
Lsat_s019.g0349.t1LD09343P
Lsat_s019.g0350.t1ANNEXIN
Lsat_s019.g0351.t1KILLER CELL LECTIN-LIKE RECEPTOR SUBFAMILY F MEMBER 2
Lsat_s019.g0352.t1HOMEOBOX PROTEIN PROSPERO/PROX-1/CEH-26
Lsat_s019.g0353.t1
Lsat_s019.g0354.t1DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED
Lsat_s019.g0355.t1DNAJ HOMOLOG SUBFAMILY C MEMBER 4
Lsat_s019.g0356.t1PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
Lsat_s019.g0357.t1
Lsat_s019.g0358.t1ZINC FINGER AND SCAN DOMAIN-CONTAINING
Lsat_s019.g0359.t1DNAJ HOMOLOG SUBFAMILY C MEMBER 4
Lsat_s019.g0360.t1SECRETED MODULAR CALCIUM-BINDING PROTEIN
Lsat_s019.g0361.t1GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1-LIKE
Lsat_s019.g0362.t1
Lsat_s019.g0363.t1
Lsat_s019.g0364.t1METAXIN RELATED
Lsat_s019.g0365.t1METAXIN RELATED
Lsat_s019.g0366.t1METAXIN RELATED
Lsat_s019.g0367.t1BREAST CANCER METASTASIS-SUPPRESSOR 1
Lsat_s019.g0368.t1
Lsat_s019.g0369.t1CHROMOSOME 20 ORF85 FAMILY MEMBER
Lsat_s019.g0370.t1
Lsat_s019.g0371.t1
Lsat_s019.g0372.t1TRANSLATION INITIATION FACTOR-RELATED
Lsat_s019.g0373.t1BARRIER TO AUTOINTEGRATION FACTOR 2
Lsat_s019.g0374.t1BARRIER TO AUTOINTEGRATION FACTOR 2
Lsat_s019.g0375.t1
Lsat_s019.g0376.t1BARRIER TO AUTOINTEGRATION FACTOR 2
Lsat_s019.g0377.t1BARRIER TO AUTOINTEGRATION FACTOR 2
Lsat_s019.g0378.t1BARRIER TO AUTOINTEGRATION FACTOR 2
Lsat_s019.g0379.t1
Lsat_s019.g0380.t1CARBON CATABOLITE REPRESSOR PROTEIN 4
Lsat_s019.g0381.t1VASOHIBIN-1-LIKE ISOFORM X2
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