About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s019.g0382.t1ERGOSTEROL BIOSYNTHETIC PROTEIN 28-RELATED
Lsat_s019.g0383.t1
Lsat_s019.g0384.t1LEUCOKININ RECEPTOR-RELATED
Lsat_s019.g0385.t1
Lsat_s019.g0386.t1RAN GTPASE-ACTIVATING PROTEIN 1
Lsat_s019.g0387.t1YEAST SPT2-RELATED
Lsat_s019.g0388.t1OPTIC ATROPHY 3 PROTEIN OPA3
Lsat_s019.g0389.t1
Lsat_s019.g0390.t1SYNAPTOTAGMIN 14, ISOFORM D
Lsat_s019.g0391.t1
Lsat_s019.g0392.t1RNA POLYMERASE II-ASSOCIATED PROTEIN 1
Lsat_s019.g0393.t1STAR-RELATED LIPID TRANSFER PROTEIN 9
Lsat_s019.g0394.t1TUBULIN EPSILON AND DELTA COMPLEX PROTEIN 1
Lsat_s019.g0395.t1UNCHARACTERIZED
Lsat_s019.g0396.t1SOLUTE CARRIER FAMILY 35 MEMBER B
Lsat_s019.g0397.t1PROTEASOME SUBUNIT ALPHA/BETA
Lsat_s019.g0398.t1TPR REPEAT CONTAINING PROTEIN
Lsat_s019.g0399.t1NF-KAPPA-B INHIBITOR ALPHA
Lsat_s019.g0400.t1USP DOMAIN-CONTAINING PROTEIN
Lsat_s019.g0401.t1USP DOMAIN-CONTAINING PROTEIN
Lsat_s019.g0402.t1
Lsat_s019.g0403.t1ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN
Lsat_s019.g0404.t1
Lsat_s019.g0405.t1HEAT SHOCK PROTEIN HSP-12.2-RELATED
Lsat_s019.g0406.t1MCG131172, ISOFORM CRA_A
Lsat_s019.g0407.t1
Lsat_s019.g0408.t1AP COMPLEX SUBUNIT MU
Lsat_s019.g0409.t1RIBOSOMAL PROTEIN S6 KINASE
Lsat_s019.g0410.t1
Lsat_s019.g0411.t1ATP-DEPENDENT RNA HELICASE
Lsat_s019.g0412.t1INOSITOL-TETRAKISPHOSPHATE 1-KINASE
Lsat_s019.g0413.t1CENTROSOMAL PROTEIN KIZUNA
Lsat_s019.g0414.t1CELL DIVISION CYCLE 16,23,27
Lsat_s019.g0415.t1SETA BINDING PROTEIN 1
Lsat_s019.g0416.t1PROTEASE U48 CAAX PRENYL PROTEASE RCE1
Lsat_s019.g0417.t1SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
Lsat_s019.g0418.t1
Lsat_s019.g0419.t1REST COREPRESSOR COREST PROTEIN-RELATED
Lsat_s019.g0420.t1
Lsat_s019.g0421.t1SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT
Lsat_s019.g0422.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 87
Lsat_s019.g0423.t1
Lsat_s019.g0424.t1B-CELL LYMPHOMA/LEUKEMIA 11
Lsat_s019.g0425.t1
Lsat_s019.g0426.t1
Lsat_s019.g0427.t1
Lsat_s019.g0428.t1-
Lsat_s019.g0429.t1
Lsat_s019.g0430.t1
Lsat_s019.g0431.t1
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