About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s019.g0282.t1
Lsat_s019.g0283.t1MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1
Lsat_s019.g0284.t1
Lsat_s019.g0285.t1
Lsat_s019.g0286.t1DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE
Lsat_s019.g0287.t1MALEYLACETOACETATE ISOMERASE
Lsat_s019.g0288.t1
Lsat_s019.g0289.t1SPLICING FACTOR 3B
Lsat_s019.g0290.t1SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR
Lsat_s019.g0291.t1
Lsat_s019.g0292.t1TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
Lsat_s019.g0293.t1
Lsat_s019.g0294.t1
Lsat_s019.g0295.t1USP DOMAIN-CONTAINING PROTEIN
Lsat_s019.g0296.t1USP DOMAIN-CONTAINING PROTEIN
Lsat_s019.g0297.t1USP DOMAIN-CONTAINING PROTEIN
Lsat_s019.g0298.t1USP DOMAIN-CONTAINING PROTEIN
Lsat_s019.g0299.t1USP DOMAIN-CONTAINING PROTEIN
Lsat_s019.g0300.t1USP DOMAIN-CONTAINING PROTEIN
Lsat_s019.g0301.t1WD REPEAT DOMAIN-CONTAINING FAMILY
Lsat_s019.g0302.t1SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN
Lsat_s019.g0303.t1MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER
Lsat_s019.g0304.t1
Lsat_s019.g0305.t1ATILLA, ISOFORM B-RELATED-RELATED
Lsat_s019.g0306.t1ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
Lsat_s019.g0307.t1
Lsat_s019.g0308.t1ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
Lsat_s019.g0309.t1DNAJ HOMOLOG SUBFAMILY C MEMBER 17
Lsat_s019.g0310.t1AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
Lsat_s019.g0311.t1AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
Lsat_s019.g0312.t1
Lsat_s019.g0313.t1AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
Lsat_s019.g0314.t1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Lsat_s019.g0315.t1
Lsat_s019.g0316.t1
Lsat_s019.g0317.t1
Lsat_s019.g0318.t1
Lsat_s019.g0319.t1
Lsat_s019.g0320.t1GREMLIN 1
Lsat_s019.g0321.t1
Lsat_s019.g0322.t1
Lsat_s019.g0323.t1FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I
Lsat_s019.g0324.t1DUMPY: SHORTER THAN WILD-TYPE
Lsat_s019.g0325.t1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12
Lsat_s019.g0326.t1THUMP DOMAIN-CONTAINING
Lsat_s019.g0327.t1PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN
Lsat_s019.g0328.t1PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
Lsat_s019.g0329.t1UNCHARACTERIZED
Lsat_s019.g0330.t1GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2
Lsat_s019.g0331.t1STAR-RELATED LIPID TRANSFER PROTEIN 9
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