About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s018.g0463.t1SPERMATHECAL PHYSIOLOGY VARIANT
Lsat_s018.g0464.t1
Lsat_s018.g0465.t1
Lsat_s018.g0466.t1
Lsat_s018.g0467.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s018.g0468.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s018.g0469.t1
Lsat_s018.g0470.t1COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN-CONTAINING PROTEIN 7
Lsat_s018.g0471.t1
Lsat_s018.g0472.t1THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED
Lsat_s018.g0473.t1
Lsat_s018.g0474.t1PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
Lsat_s018.g0475.t1PROTEIN EVA-1
Lsat_s018.g0476.t1PEPTIDASE
Lsat_s018.g0477.t1CYSTEINE AND GLYCINE-RICH PROTEIN 2 BINDING PROTEIN
Lsat_s018.g0478.t1CXC DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s018.g0479.t1
Lsat_s018.g0480.t1PROTEIN EVA-1
Lsat_s018.g0481.t1PEPTIDOGLYCAN RECOGNITION PROTEIN
Lsat_s019.g0001.t1
Lsat_s019.g0002.t1TRANSCRIPTION TERMINATION FACTOR, MITOCHONDRIAL
Lsat_s019.g0003.t1
Lsat_s019.g0004.t1
Lsat_s019.g0005.t1AQUAPORIN TRANSPORTER
Lsat_s019.g0006.t1AQUAPORIN TRANSPORTER
Lsat_s019.g0007.t1
Lsat_s019.g0008.t1
Lsat_s019.g0009.t1AQUAPORIN TRANSPORTER
Lsat_s019.g0010.t1AMINO ACID TRANSPORTER
Lsat_s019.g0011.t1
Lsat_s019.g0012.t1AQUAPORIN TRANSPORTER
Lsat_s019.g0013.t1AQUAPORIN TRANSPORTER
Lsat_s019.g0014.t1GAMMA GLUTAMYL TRANSPEPTIDASE
Lsat_s019.g0015.t1MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE
Lsat_s019.g0016.t1
Lsat_s019.g0017.t1PROTEIN CBG20215-RELATED
Lsat_s019.g0018.t1-
Lsat_s019.g0019.t1-
Lsat_s019.g0020.t1-
Lsat_s019.g0021.t1HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
Lsat_s019.g0022.t1
Lsat_s019.g0023.t1
Lsat_s019.g0024.t1AVIDIN-RELATED
Lsat_s019.g0025.t1
Lsat_s019.g0026.t1
Lsat_s019.g0027.t1
Lsat_s019.g0028.t1C-TYPE LECTIN DOMAIN FAMILY 20 MEMBER A-RELATED
Lsat_s019.g0029.t1
Lsat_s019.g0030.t1LITHOSTATHINE
Lsat_s019.g0031.t1
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