About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s018.g0263.t1AAA DOMAIN-CONTAINING
Lsat_s018.g0264.t1
Lsat_s018.g0265.t1DUF3504 DOMAIN-CONTAINING PROTEIN
Lsat_s018.g0266.t1
Lsat_s018.g0267.t1PEROXISOMAL BIOGENESIS FACTOR 3
Lsat_s018.g0268.t1TUDOR DOMAIN CONTAINING PROTEIN
Lsat_s018.g0269.t1METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN
Lsat_s018.g0270.t1DYNEIN INTERMEDIATE CHAIN
Lsat_s018.g0271.t1THIOREDOXIN PEROXIDASE
Lsat_s018.g0272.t1
Lsat_s018.g0273.t1
Lsat_s018.g0274.t1
Lsat_s018.g0275.t1THREE PRIME REPAIR EXONUCLEASE 1, 2
Lsat_s018.g0276.t1GLUTAREDOXIN
Lsat_s018.g0277.t1THIOREDOXIN
Lsat_s018.g0278.t1
Lsat_s018.g0279.t1MITOGEN-ACTIVATED PROTEIN KINASE
Lsat_s018.g0280.t1PBS LYASE HEAT-LIKE PROTEIN
Lsat_s018.g0281.t1CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)
Lsat_s018.g0282.t1
Lsat_s018.g0283.t1
Lsat_s018.g0284.t1UNCHARACTERIZED
Lsat_s018.g0285.t1GUANINE NUCLEOTIDE EXCHANGE C9ORF72
Lsat_s018.g0286.t1DULLARD PROTEIN PHOSPHATASE
Lsat_s018.g0287.t1
Lsat_s018.g0288.t1
Lsat_s018.g0289.t1
Lsat_s018.g0290.t1
Lsat_s018.g0291.t1
Lsat_s018.g0292.t1-
Lsat_s018.g0293.t1
Lsat_s018.g0294.t1
Lsat_s018.g0295.t1
Lsat_s018.g0296.t1
Lsat_s018.g0297.t1
Lsat_s018.g0298.t1KELCH PROTEIN
Lsat_s018.g0299.t1LEUCINE RICH REPEAT PROTEIN
Lsat_s018.g0300.t1GLYCOSYLTRANSFERASE 14 FAMILY MEMBER
Lsat_s018.g0301.t1PHOSPHOLIPASE A-2-ACTIVATING PROTEIN
Lsat_s018.g0302.t1IMPORTIN BETA
Lsat_s018.g0303.t1
Lsat_s018.g0304.t1MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
Lsat_s018.g0305.t1PROPERDIN
Lsat_s018.g0306.t1PROPERDIN
Lsat_s018.g0307.t1
Lsat_s018.g0308.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s018.g0309.t140S RIBOSOMAL PROTEIN S11 FAMILY MEMBER
Lsat_s018.g0310.t1
Lsat_s018.g0311.t1
Lsat_s018.g0312.t1
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