About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s018.g0063.t1
Lsat_s018.g0064.t1
Lsat_s018.g0065.t1
Lsat_s018.g0066.t1
Lsat_s018.g0067.t1ANKYRIN REPEAT-CONTAINING
Lsat_s018.g0068.t1PATHOGENESIS-RELATED FAMILY PROTEIN
Lsat_s018.g0069.t1
Lsat_s018.g0070.t1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT
Lsat_s018.g0071.t1
Lsat_s018.g0072.t1NOTCH LIGAND FAMILY MEMBER
Lsat_s018.g0073.t1LYSINE-SPECIFIC DEMETHYLASE
Lsat_s018.g0074.t1CYTOKINE RECEPTOR
Lsat_s018.g0075.t1
Lsat_s018.g0076.t1YIPPEE DOMAIN-CONTAINING PROTEIN
Lsat_s018.g0077.t1PROTEIN CBG26694
Lsat_s018.g0078.t1
Lsat_s018.g0079.t1SERINE/THREONINE-PROTEIN KINASE PLK
Lsat_s018.g0080.t1CHIMERIN FAMILY MEMBER
Lsat_s018.g0081.t1
Lsat_s018.g0082.t1
Lsat_s018.g0083.t1PLASMINOGEN RECEPTOR (KT)
Lsat_s018.g0084.t1UNCHARACTERIZED
Lsat_s018.g0085.t1SPERMATOGENESIS-ASSOCIATED PROTEIN 6 SPATA6
Lsat_s018.g0086.t1
Lsat_s018.g0087.t1
Lsat_s018.g0088.t139S RIBOSOMAL PROTEIN L55, MITOCHONDRIAL
Lsat_s018.g0089.t1CYSTINOSIN
Lsat_s018.g0090.t1GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT
Lsat_s018.g0091.t1
Lsat_s018.g0092.t1METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA TYPE C PROTEIN
Lsat_s018.g0093.t1CYTOCHROME P450 FAMILY 4
Lsat_s018.g0094.t1CYTOCHROME P450 FAMILY 4
Lsat_s018.g0095.t1METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA TYPE C PROTEIN
Lsat_s018.g0096.t1
Lsat_s018.g0097.t1
Lsat_s018.g0098.t1
Lsat_s018.g0099.t1CYTOCHROME P450 FAMILY 4
Lsat_s018.g0100.t1CYTOCHROME P450 FAMILY 4
Lsat_s018.g0101.t1
Lsat_s018.g0102.t1
Lsat_s018.g0103.t1
Lsat_s018.g0104.t1LIPASE
Lsat_s018.g0105.t1PEPTIDOGLYCAN RECOGNITION PROTEIN
Lsat_s018.g0106.t1ENDONUCLEASE V
Lsat_s018.g0107.t1
Lsat_s018.g0108.t1GH11358P
Lsat_s018.g0109.t1
Lsat_s018.g0110.t1CYSTINOSIN
Lsat_s018.g0111.t1
Lsat_s018.g0112.t1RAS-RELATED PROTEIN RAB
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