About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s017.g0298.t1
Lsat_s017.g0299.t1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
Lsat_s017.g0300.t1RAB GDP/GTP EXCHANGE FACTOR
Lsat_s017.g0301.t1VESICLE-ASSOCIATED MEMBRANE PROTEIN 4
Lsat_s017.g0302.t1
Lsat_s017.g0303.t1
Lsat_s017.g0304.t1CBL
Lsat_s017.g0305.t1UNCHARACTERIZED
Lsat_s017.g0306.t1
Lsat_s017.g0307.t1ABC TRANSPORTER G FAMILY MEMBER 28
Lsat_s017.g0308.t1
Lsat_s017.g0309.t1TATD FAMILY DEOXYRIBONUCLEASE
Lsat_s017.g0310.t1PROTEIN SIDEKICK
Lsat_s017.g0311.t1
Lsat_s017.g0312.t1UNCHARACTERIZED
Lsat_s017.g0313.t1SWIM-TYPE DOMAIN-CONTAINING PROTEIN
Lsat_s017.g0314.t1TUDOR DOMAIN CONTAINING PROTEIN
Lsat_s017.g0315.t1SERINE/THREONINE-PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 10-RELATED
Lsat_s017.g0316.t1SERINE/THREONINE-PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 10-RELATED
Lsat_s017.g0317.t1MITOCHONDRIAL RIBOSOMAL PROTEIN S18B
Lsat_s017.g0318.t1NEGATIVE ELONGATION FACTOR E
Lsat_s017.g0319.t126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9
Lsat_s017.g0320.t1PROPERDIN
Lsat_s017.g0321.t1
Lsat_s017.g0322.t1ADHESION G-PROTEIN COUPLED RECEPTOR
Lsat_s017.g0323.t1
Lsat_s017.g0324.t1
Lsat_s017.g0325.t1CALPONIN
Lsat_s017.g0326.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s017.g0327.t1
Lsat_s017.g0328.t1HOMEO BOX HB9 LIKE A-RELATED
Lsat_s017.g0329.t1
Lsat_s017.g0330.t1
Lsat_s017.g0331.t1UNCHARACTERIZED
Lsat_s017.g0332.t1UNHEALTHY RIBOSOME BIOGENESIS PROTEIN 2 HOMOLOG
Lsat_s017.g0333.t1
Lsat_s017.g0334.t1
Lsat_s017.g0335.t1
Lsat_s017.g0336.t1
Lsat_s017.g0337.t1
Lsat_s017.g0338.t1
Lsat_s017.g0339.t1
Lsat_s017.g0340.t1
Lsat_s017.g0341.t1
Lsat_s017.g0342.t1PROTEIN CIP2A
Lsat_s017.g0343.t1
Lsat_s017.g0344.t1
Lsat_s017.g0345.t1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s017.g0346.t1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s017.g0347.t1
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