About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s017.g0148.t1BAND 7 PROTEIN-RELATED
Lsat_s017.g0149.t1
Lsat_s017.g0150.t1
Lsat_s017.g0151.t1N-ACETYLGALACTOSAMINYLTRANSFERASE
Lsat_s017.g0152.t1
Lsat_s017.g0153.t1
Lsat_s017.g0154.t1
Lsat_s017.g0155.t1N-ACETYLGALACTOSAMINYLTRANSFERASE
Lsat_s017.g0156.t1
Lsat_s017.g0157.t1N-ACETYLGALACTOSAMINYLTRANSFERASE
Lsat_s017.g0158.t1N-ACETYLGALACTOSAMINYLTRANSFERASE
Lsat_s017.g0159.t1LIN-24 (TWENTY-FOUR) LIKE
Lsat_s017.g0160.t1LIN-24 (TWENTY-FOUR) LIKE
Lsat_s017.g0161.t1LIN-24 (TWENTY-FOUR) LIKE
Lsat_s017.g0162.t1LIN-24 (TWENTY-FOUR) LIKE
Lsat_s017.g0163.t1LIN-24 (TWENTY-FOUR) LIKE
Lsat_s017.g0164.t1LIN-24 (TWENTY-FOUR) LIKE
Lsat_s017.g0165.t1LIN-24 (TWENTY-FOUR) LIKE
Lsat_s017.g0166.t1LIN-24 (TWENTY-FOUR) LIKE
Lsat_s017.g0167.t1LIN-24 (TWENTY-FOUR) LIKE
Lsat_s017.g0168.t1PARTNER OF XRN-2 PROTEIN 1
Lsat_s017.g0169.t130S 40S RIBOSOMAL PROTEIN
Lsat_s017.g0170.t1RAS GTPASE-ACTIVATING PROTEINS
Lsat_s017.g0171.t1LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED
Lsat_s017.g0172.t1UNCHARACTERIZED
Lsat_s017.g0173.t1MOLTING PROTEIN MLT-4
Lsat_s017.g0174.t1B-CELL TRANSLOCATION GENE
Lsat_s017.g0175.t139S RIBOSOMAL PROTEIN L40, MITOCHONDRIAL
Lsat_s017.g0176.t1DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A
Lsat_s017.g0177.t1DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A
Lsat_s017.g0178.t1HOMOSERINE O-ACETYLTRANSFERASE
Lsat_s017.g0179.t11-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE
Lsat_s017.g0180.t1UPF0315 PROTEIN-RELATED
Lsat_s017.g0181.t1QUEUINE TRNA-RIBOSYLTRANSFERASE ACCESSORY SUBUNIT 2
Lsat_s017.g0182.t1RIBOSOME RECYCLING FACTOR
Lsat_s017.g0183.t1PROTEIN FAM78A
Lsat_s017.g0184.t1SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE
Lsat_s017.g0185.t1PREFOLDIN SUBUNIT 6
Lsat_s017.g0186.t1SURFEIT LOCUS PROTEIN
Lsat_s017.g0187.t1INNEXIN
Lsat_s017.g0188.t1
Lsat_s017.g0189.t1INNEXIN
Lsat_s017.g0190.t1INNEXIN
Lsat_s017.g0191.t1
Lsat_s017.g0192.t1QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE
Lsat_s017.g0193.t1TON-B BOX DOMAIN
Lsat_s017.g0194.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 105
Lsat_s017.g0195.t1DRAB11-RELATED
Lsat_s017.g0196.t1
Lsat_s017.g0197.t1
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