About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s016.g0374.t1
Lsat_s016.g0375.t1ARMC5 ARMADILLO REPEAT-CONTAINING -RELATED
Lsat_s016.g0376.t1
Lsat_s016.g0377.t1CADHERIN-87A
Lsat_s016.g0378.t1
Lsat_s016.g0379.t1CADHERIN-87A
Lsat_s016.g0380.t1RAB GTPASE-BINDING EFFECTOR PROTEIN
Lsat_s016.g0381.t1CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING
Lsat_s016.g0382.t1NGG1 INTERACTING FACTOR 3
Lsat_s016.g0383.t1NUCLEASE-RELATED
Lsat_s016.g0384.t1MYOSIN HEAVY CHAIN, NON-MUSCLE
Lsat_s016.g0385.t1CALCIUM-ACTIVATED POTASSIUM CHANNEL SUBUNIT BETA
Lsat_s016.g0386.t1
Lsat_s016.g0387.t1TRANSMEMBRANE PROTEIN 237
Lsat_s016.g0388.t1
Lsat_s016.g0389.t1
Lsat_s016.g0390.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s016.g0391.t1SEPTIN
Lsat_s016.g0392.t1OS10G0105400 PROTEIN
Lsat_s016.g0393.t1
Lsat_s016.g0394.t1STANNIOCALCIN
Lsat_s016.g0395.t1
Lsat_s016.g0396.t1
Lsat_s016.g0397.t1OS10G0105400 PROTEIN
Lsat_s016.g0398.t1
Lsat_s016.g0399.t1
Lsat_s016.g0400.t1OS10G0105400 PROTEIN
Lsat_s016.g0401.t1SOLUTE CARRIER FAMILY 22 MEMBER
Lsat_s016.g0402.t1OS10G0105400 PROTEIN
Lsat_s016.g0403.t1STANNIOCALCIN
Lsat_s016.g0404.t1OS10G0105400 PROTEIN
Lsat_s016.g0405.t1OS10G0105400 PROTEIN
Lsat_s016.g0406.t1STANNIOCALCIN
Lsat_s016.g0407.t1
Lsat_s016.g0408.t1OS10G0105400 PROTEIN
Lsat_s016.g0409.t1METHYLTRANSFERASE, FKBM FAMILY PROTEIN
Lsat_s016.g0410.t1BLR2807 PROTEIN
Lsat_s016.g0411.t1GLUCOSE INHIBITED DIVISION PROTEIN A
Lsat_s016.g0412.t1
Lsat_s016.g0413.t15-HYDROXYTRYPTAMINE RECEPTOR
Lsat_s016.g0414.t1GLUCOSE INHIBITED DIVISION PROTEIN A
Lsat_s016.g0415.t1PROTEIN-TYROSINE SULFOTRANSFERASE 2
Lsat_s016.g0416.t1
Lsat_s016.g0417.t1XPA-BINDING PROTEIN 1-RELATED
Lsat_s016.g0418.t1PROTEIN KINASE RELATED
Lsat_s016.g0419.t1PROTEIN KINASE RELATED
Lsat_s016.g0420.t1PELOTA
Lsat_s016.g0421.t1CRUMBS FAMILY MEMBER
Lsat_s016.g0422.t1AGL056WP
Lsat_s016.g0423.t1
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