Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s016.g0124.t1 | |
Lsat_s016.g0125.t1 | SERINE BETA-LACTAMASE-LIKE PROTEIN LACTB, MITOCHONDRIAL |
Lsat_s016.g0126.t1 | D-DOPACHROME DECARBOXYLASE |
Lsat_s016.g0127.t1 | |
Lsat_s016.g0128.t1 | SOLUTE CARRIER FAMILY 13 MEMBER |
Lsat_s016.g0129.t1 | |
Lsat_s016.g0130.t1 | SOLUTE CARRIER FAMILY 13 MEMBER |
Lsat_s016.g0131.t1 | SOLUTE CARRIER FAMILY 13 MEMBER |
Lsat_s016.g0132.t1 | |
Lsat_s016.g0133.t1 | SOLUTE CARRIER FAMILY 13 MEMBER |
Lsat_s016.g0134.t1 | SOLUTE CARRIER FAMILY 13 MEMBER |
Lsat_s016.g0135.t1 | |
Lsat_s016.g0136.t1 | SOLUTE CARRIER FAMILY 13 MEMBER |
Lsat_s016.g0137.t1 | |
Lsat_s016.g0138.t1 | COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN |
Lsat_s016.g0139.t1 | SRR1-LIKE PROTEIN |
Lsat_s016.g0140.t1 | SERINE/THREONINE-PROTEIN KINASE |
Lsat_s016.g0141.t1 | SWIM-TYPE DOMAIN-CONTAINING PROTEIN |
Lsat_s016.g0142.t1 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Lsat_s016.g0143.t1 | |
Lsat_s016.g0144.t1 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
Lsat_s016.g0145.t1 | - |
Lsat_s016.g0146.t1 | MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG |
Lsat_s016.g0147.t1 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
Lsat_s016.g0148.t1 | INOSITOL 5-PHOSPHATASE |
Lsat_s016.g0149.t1 | MICROSOMAL GLUTATHIONE S-TRANSFERASE |
Lsat_s016.g0150.t1 | MICROSOMAL GLUTATHIONE S-TRANSFERASE |
Lsat_s016.g0151.t1 | SLEI FAMILY PROTEIN |
Lsat_s016.g0152.t1 | SOLUTE CARRIER FAMILY 13 MEMBER |
Lsat_s016.g0153.t1 | SOLUTE CARRIER FAMILY 13 MEMBER |
Lsat_s016.g0154.t1 | SOLUTE CARRIER FAMILY 13 MEMBER |
Lsat_s016.g0155.t1 | |
Lsat_s016.g0156.t1 | - |
Lsat_s016.g0157.t1 | RING ZINC FINGER |
Lsat_s016.g0158.t1 | |
Lsat_s016.g0159.t1 | |
Lsat_s016.g0160.t1 | LEYDIG CELL TUMOR 10 KDA PROTEIN HOMOLOG |
Lsat_s016.g0161.t1 | SARM1 |
Lsat_s016.g0162.t1 | RAS-RELATED PROTEIN RAB |
Lsat_s016.g0163.t1 | PROTEIN ABHD11 |
Lsat_s016.g0164.t1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Lsat_s016.g0165.t1 | |
Lsat_s016.g0166.t1 | OS10G0105400 PROTEIN |
Lsat_s016.g0167.t1 | OS10G0105400 PROTEIN |
Lsat_s016.g0168.t1 | UNCHARACTERIZED |
Lsat_s016.g0169.t1 | |
Lsat_s016.g0170.t1 | UNCHARACTERIZED |
Lsat_s016.g0171.t1 | |
Lsat_s016.g0172.t1 | |
Lsat_s016.g0173.t1 |