Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s015.g0277.t1 | |
Lsat_s015.g0278.t1 | PROPERDIN |
Lsat_s015.g0279.t1 | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED |
Lsat_s015.g0280.t1 | SPLICING FACTOR YJU2 |
Lsat_s015.g0281.t1 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED |
Lsat_s015.g0282.t1 | PROLACTIN REGULATORY ELEMENT BINDING PROTEIN |
Lsat_s015.g0283.t1 | CENTROSOME SPINDLE POLE ASSOCIATED PROTEIN |
Lsat_s015.g0284.t1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
Lsat_s015.g0285.t1 | HL07962P-RELATED |
Lsat_s015.g0286.t1 | |
Lsat_s015.g0287.t1 | SOLUTE CARRIER FAMILY 35 MEMBER B |
Lsat_s015.g0288.t1 | THO COMPLEX SUBUNIT 1 |
Lsat_s015.g0289.t1 | |
Lsat_s015.g0290.t1 | TYROSINE-PROTEIN KINASE |
Lsat_s015.g0291.t1 | GLUCOKINASE REGULATORY PROTEIN |
Lsat_s015.g0292.t1 | TYROSINE-PROTEIN KINASE |
Lsat_s015.g0293.t1 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Lsat_s015.g0294.t1 | |
Lsat_s015.g0295.t1 | ZINC FINGER PROTEIN |
Lsat_s015.g0296.t1 | TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBER |
Lsat_s015.g0297.t1 | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA |
Lsat_s015.g0298.t1 | |
Lsat_s015.g0299.t1 | 60 KDA RIBONUCLEOPROTEIN SSA/RO |
Lsat_s015.g0300.t1 | |
Lsat_s015.g0301.t1 | |
Lsat_s015.g0302.t1 | 60 KDA RIBONUCLEOPROTEIN SSA/RO |
Lsat_s015.g0303.t1 | LONGEVITY ASSURANCE FACTOR 1 LAG1 |
Lsat_s015.g0304.t1 | PROTEIN CBG26694 |
Lsat_s015.g0305.t1 | ZINC/IRON TRANSPORTER |
Lsat_s015.g0306.t1 | |
Lsat_s015.g0307.t1 | HISTONE ACETYLTRANSFERASE COMPLEX |
Lsat_s015.g0308.t1 | ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 1 |
Lsat_s015.g0309.t1 | UNCHARACTERIZED |
Lsat_s015.g0310.t1 | THIOPURINE S-METHYLTRANSFERASE |
Lsat_s015.g0311.t1 | |
Lsat_s015.g0312.t1 | |
Lsat_s015.g0313.t1 | |
Lsat_s015.g0314.t1 | ISOMERASE |
Lsat_s015.g0315.t1 | |
Lsat_s015.g0316.t1 | LD44762P |
Lsat_s015.g0317.t1 | |
Lsat_s015.g0318.t1 | |
Lsat_s015.g0319.t1 | THIOREDOXIN-LIKE PROTEIN 1 |
Lsat_s015.g0320.t1 | TRIMERIC INTRACELLULAR CATION CHANNEL |
Lsat_s015.g0321.t1 | - |
Lsat_s015.g0322.t1 | TRIMERIC INTRACELLULAR CATION CHANNEL |
Lsat_s015.g0323.t1 | |
Lsat_s015.g0324.t1 | TRIMERIC INTRACELLULAR CATION CHANNEL |
Lsat_s015.g0325.t1 | PROPERDIN |
Lsat_s015.g0326.t1 | PROPERDIN |