About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s015.g0077.t1SYNAPTIC VESICLE GLYCOPROTEIN 2
Lsat_s015.g0078.t1
Lsat_s015.g0079.t1TSEC1-RELATED
Lsat_s015.g0080.t1RFX TRANSCRIPTION FACTOR FAMILY
Lsat_s015.g0081.t1
Lsat_s015.g0082.t1SMAD
Lsat_s015.g0083.t1
Lsat_s015.g0084.t1
Lsat_s015.g0085.t1
Lsat_s015.g0086.t1
Lsat_s015.g0087.t1DYMECLIN
Lsat_s015.g0088.t1EIF4G DOMAIN PROTEIN
Lsat_s015.g0089.t1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Lsat_s015.g0090.t1MESODERM DEVELOPMENT CANDIDATE 2
Lsat_s015.g0091.t1SIN3B-RELATED
Lsat_s015.g0092.t1PROTEIN SIDEKICK
Lsat_s015.g0093.t1
Lsat_s015.g0094.t1
Lsat_s015.g0095.t1ACID PHOSPHATASE-RELATED
Lsat_s015.g0096.t1ACID PHOSPHATASE-RELATED
Lsat_s015.g0097.t1ACID PHOSPHATASE-RELATED
Lsat_s015.g0098.t1ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY
Lsat_s015.g0099.t1
Lsat_s015.g0100.t1
Lsat_s015.g0101.t1
Lsat_s015.g0102.t1
Lsat_s015.g0103.t1
Lsat_s015.g0104.t1
Lsat_s015.g0105.t1
Lsat_s015.g0106.t1
Lsat_s015.g0107.t1
Lsat_s015.g0108.t1WD REPEAT DOMAIN 60
Lsat_s015.g0109.t1
Lsat_s015.g0110.t1PROTEIN EVA-1
Lsat_s015.g0111.t1
Lsat_s015.g0112.t1PROTEIN EVA-1
Lsat_s015.g0113.t1FI02073P
Lsat_s015.g0114.t1CYSTEINE PROTEASE FAMILY C1-RELATED
Lsat_s015.g0115.t1CYSTEINE PROTEASE FAMILY C1-RELATED
Lsat_s015.g0116.t1
Lsat_s015.g0117.t1CYSTEINE PROTEASE FAMILY C1-RELATED
Lsat_s015.g0118.t1
Lsat_s015.g0119.t1
Lsat_s015.g0120.t1
Lsat_s015.g0121.t1
Lsat_s015.g0122.t1
Lsat_s015.g0123.t1COLLAGEN ALPHA
Lsat_s015.g0124.t1
Lsat_s015.g0125.t1ADHESION G-PROTEIN COUPLED RECEPTOR
Lsat_s015.g0126.t1
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