About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s014.g0408.t1IRE1-RELATED
Lsat_s014.g0409.t1
Lsat_s014.g0410.t1
Lsat_s014.g0411.t1
Lsat_s014.g0412.t1
Lsat_s014.g0413.t1
Lsat_s014.g0414.t1
Lsat_s014.g0415.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Lsat_s014.g0416.t1WD REPEAT-CONTAINING PROTEIN 75
Lsat_s014.g0417.t1
Lsat_s014.g0418.t1
Lsat_s014.g0419.t1GLYCINE AMIDINOTRANSFERASE, MITOCHONDRIAL
Lsat_s014.g0420.t1
Lsat_s014.g0421.t1
Lsat_s014.g0422.t1
Lsat_s014.g0423.t1
Lsat_s014.g0424.t1EAP30 SUBUNIT OF ELL COMPLEX
Lsat_s014.g0425.t1TOL-PAL SYSTEM PROTEIN TOLA
Lsat_s014.g0426.t1
Lsat_s014.g0427.t1
Lsat_s014.g0428.t1
Lsat_s014.g0429.t1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 24
Lsat_s014.g0430.t1PROTEIN FAM221A-RELATED
Lsat_s014.g0431.t1SOLUTE CARRIER FAMILY 40 MEMBER
Lsat_s014.g0432.t1SI:DKEY-192D15.2-RELATED
Lsat_s014.g0433.t1ZINC FINGER PROTEIN
Lsat_s014.g0434.t1PROTEIN CBG10425
Lsat_s014.g0435.t1
Lsat_s014.g0436.t1G PROTEIN-COUPLED RECEPTOR
Lsat_s014.g0437.t1
Lsat_s014.g0438.t1
Lsat_s014.g0439.t1ATILLA, ISOFORM B-RELATED-RELATED
Lsat_s014.g0440.t1CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN B
Lsat_s014.g0441.t1
Lsat_s014.g0442.t1DNA HELICASE RECQ FAMILY MEMBER
Lsat_s014.g0443.t1DNAJ HOMOLOG SUBFAMILY B MEMBER 2
Lsat_s014.g0444.t1CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P
Lsat_s014.g0445.t1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
Lsat_s014.g0446.t1TGF-BETA FAMILY
Lsat_s014.g0447.t1
Lsat_s014.g0448.t1
Lsat_s014.g0449.t1ACYL-COA-BINDING PROTEIN, ACBP
Lsat_s014.g0450.t1
Lsat_s014.g0451.t1
Lsat_s014.g0452.t1KH DOMAIN CONTAINING RNA BINDING PROTEIN
Lsat_s014.g0453.t1
Lsat_s014.g0454.t1
Lsat_s014.g0455.t1
Lsat_s014.g0456.t1PROTEIN CBG12054-RELATED
Lsat_s014.g0457.t1
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