About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s014.g0158.t1
Lsat_s014.g0159.t1POLYCYSTIN FAMILY MEMBER
Lsat_s014.g0160.t1DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2
Lsat_s014.g0161.t1POLYCYSTIN FAMILY MEMBER
Lsat_s014.g0162.t1POLYCYSTIN FAMILY MEMBER
Lsat_s014.g0163.t1TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED
Lsat_s014.g0164.t1LITTLE ELONGATION COMPLEX SUBUNIT 2
Lsat_s014.g0165.t1RAS-RELATED PROTEIN RAB
Lsat_s014.g0166.t1KINETOCHORE PROTEIN SPC25-RELATED
Lsat_s014.g0167.t1LONGEVITY ASSURANCE FACTOR 1 LAG1
Lsat_s014.g0168.t160S RIBOSOMAL PROTEIN L27
Lsat_s014.g0169.t1DUAL SPECIFICITY PROTEIN PHOSPHATASE 19
Lsat_s014.g0170.t1FIDIPIDINE
Lsat_s014.g0171.t1EG:EG0003.4 PROTEIN-RELATED
Lsat_s014.g0172.t1FIDIPIDINE
Lsat_s014.g0173.t1
Lsat_s014.g0174.t1
Lsat_s014.g0175.t1
Lsat_s014.g0176.t1
Lsat_s014.g0177.t1
Lsat_s014.g0178.t1
Lsat_s014.g0179.t1DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT
Lsat_s014.g0180.t1HOMEOBOX PROTEIN ARISTALESS
Lsat_s014.g0181.t1ZINC FINGER PROTEIN
Lsat_s014.g0182.t1CULLIN
Lsat_s014.g0183.t1INSULIN-INDUCED GENE 1
Lsat_s014.g0184.t1ADENYLATE CYCLASE TYPE 1
Lsat_s014.g0185.t1
Lsat_s014.g0186.t1
Lsat_s014.g0187.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s014.g0188.t1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
Lsat_s014.g0189.t1
Lsat_s014.g0190.t1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
Lsat_s014.g0191.t1
Lsat_s014.g0192.t1DFG10 PROTEIN
Lsat_s014.g0193.t1
Lsat_s014.g0194.t1
Lsat_s014.g0195.t1
Lsat_s014.g0196.t1CRUMBS FAMILY MEMBER
Lsat_s014.g0197.t1
Lsat_s014.g0198.t1
Lsat_s014.g0199.t1DYNAMIN
Lsat_s014.g0200.t1WD40 REPEAT DOMAIN 95
Lsat_s014.g0201.t1DYNAMIN
Lsat_s014.g0202.t1
Lsat_s014.g0203.t1E3 UBIQUITIN-PROTEIN LIGASE MIB2
Lsat_s014.g0204.t1DYNAMIN
Lsat_s014.g0205.t1DYNAMIN
Lsat_s014.g0206.t1
Lsat_s014.g0207.t1
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