About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s013.g0448.t1KRAB AND ZINC FINGER DOMAIN-CONTAINING
Lsat_s013.g0449.t1ZINC FINGER PROTEIN
Lsat_s013.g0450.t1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Lsat_s013.g0451.t1DEOXYRIBONUCLEASE II
Lsat_s013.g0452.t1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Lsat_s013.g0453.t1DEOXYRIBONUCLEASE II
Lsat_s013.g0454.t1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Lsat_s013.g0455.t1DEOXYRIBONUCLEASE II
Lsat_s013.g0456.t1DELTA-AMINOLEVULINIC ACID DEHYDRATASE
Lsat_s013.g0457.t1SNARE-ASSOCIATED PROTEIN SNAPIN
Lsat_s013.g0458.t1URICASE
Lsat_s013.g0459.t1
Lsat_s013.g0460.t1UNCHARACTERIZED
Lsat_s013.g0461.t1UNCHARACTERIZED
Lsat_s013.g0462.t1EPH RECEPTOR A5
Lsat_s013.g0463.t1
Lsat_s013.g0464.t1
Lsat_s013.g0465.t1
Lsat_s013.g0466.t1LP04239P
Lsat_s013.g0467.t1
Lsat_s013.g0468.t1
Lsat_s013.g0469.t1
Lsat_s013.g0470.t1ANTIBIOTIC RESISTANCE PROTEIN MCBG
Lsat_s013.g0471.t1
Lsat_s013.g0472.t1RAP GTPASE-ACTIVATING PROTEIN
Lsat_s013.g0473.t1SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA
Lsat_s013.g0474.t1
Lsat_s013.g0475.t1
Lsat_s013.g0476.t1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Lsat_s013.g0477.t1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Lsat_s013.g0478.t1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Lsat_s013.g0479.t1NETRIN/LAMININ-RELATED
Lsat_s013.g0480.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 39
Lsat_s013.g0481.t1
Lsat_s013.g0482.t1NOTCH LIGAND FAMILY MEMBER
Lsat_s013.g0483.t1RAB6-INTERACTING PROTEIN GORAB
Lsat_s013.g0484.t1E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1
Lsat_s013.g0485.t126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED
Lsat_s013.g0486.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 180
Lsat_s013.g0487.t1ARRESTIN DOMAIN CONTAINING PROTEIN
Lsat_s013.g0488.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 180
Lsat_s013.g0489.t1BAT2 HLA-B-ASSOCIATED TRANSCRIPT 2
Lsat_s013.g0490.t1
Lsat_s014.g0001.t1RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT
Lsat_s014.g0002.t1
Lsat_s014.g0003.t1
Lsat_s014.g0004.t1COLLAGEN ALPHA
Lsat_s014.g0005.t1
Lsat_s014.g0006.t1RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT
Lsat_s014.g0007.t1
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