Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s013.g0448.t1 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
Lsat_s013.g0449.t1 | ZINC FINGER PROTEIN |
Lsat_s013.g0450.t1 | AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C |
Lsat_s013.g0451.t1 | DEOXYRIBONUCLEASE II |
Lsat_s013.g0452.t1 | AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C |
Lsat_s013.g0453.t1 | DEOXYRIBONUCLEASE II |
Lsat_s013.g0454.t1 | AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C |
Lsat_s013.g0455.t1 | DEOXYRIBONUCLEASE II |
Lsat_s013.g0456.t1 | DELTA-AMINOLEVULINIC ACID DEHYDRATASE |
Lsat_s013.g0457.t1 | SNARE-ASSOCIATED PROTEIN SNAPIN |
Lsat_s013.g0458.t1 | URICASE |
Lsat_s013.g0459.t1 | |
Lsat_s013.g0460.t1 | UNCHARACTERIZED |
Lsat_s013.g0461.t1 | UNCHARACTERIZED |
Lsat_s013.g0462.t1 | EPH RECEPTOR A5 |
Lsat_s013.g0463.t1 | |
Lsat_s013.g0464.t1 | |
Lsat_s013.g0465.t1 | |
Lsat_s013.g0466.t1 | LP04239P |
Lsat_s013.g0467.t1 | |
Lsat_s013.g0468.t1 | |
Lsat_s013.g0469.t1 | |
Lsat_s013.g0470.t1 | ANTIBIOTIC RESISTANCE PROTEIN MCBG |
Lsat_s013.g0471.t1 | |
Lsat_s013.g0472.t1 | RAP GTPASE-ACTIVATING PROTEIN |
Lsat_s013.g0473.t1 | SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA |
Lsat_s013.g0474.t1 | |
Lsat_s013.g0475.t1 | |
Lsat_s013.g0476.t1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Lsat_s013.g0477.t1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Lsat_s013.g0478.t1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Lsat_s013.g0479.t1 | NETRIN/LAMININ-RELATED |
Lsat_s013.g0480.t1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 39 |
Lsat_s013.g0481.t1 | |
Lsat_s013.g0482.t1 | NOTCH LIGAND FAMILY MEMBER |
Lsat_s013.g0483.t1 | RAB6-INTERACTING PROTEIN GORAB |
Lsat_s013.g0484.t1 | E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 |
Lsat_s013.g0485.t1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED |
Lsat_s013.g0486.t1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 180 |
Lsat_s013.g0487.t1 | ARRESTIN DOMAIN CONTAINING PROTEIN |
Lsat_s013.g0488.t1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 180 |
Lsat_s013.g0489.t1 | BAT2 HLA-B-ASSOCIATED TRANSCRIPT 2 |
Lsat_s013.g0490.t1 | |
Lsat_s014.g0001.t1 | RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT |
Lsat_s014.g0002.t1 | |
Lsat_s014.g0003.t1 | |
Lsat_s014.g0004.t1 | COLLAGEN ALPHA |
Lsat_s014.g0005.t1 | |
Lsat_s014.g0006.t1 | RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT |
Lsat_s014.g0007.t1 |