Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s013.g0198.t1 | FK506-BINDING PROTEIN 15 |
Lsat_s013.g0199.t1 | |
Lsat_s013.g0200.t1 | |
Lsat_s013.g0201.t1 | |
Lsat_s013.g0202.t1 | |
Lsat_s013.g0203.t1 | |
Lsat_s013.g0204.t1 | CLASS IV SAM-BINDING METHYLTRANSFERASE-RELATED |
Lsat_s013.g0205.t1 | |
Lsat_s013.g0206.t1 | TELOMERE LENGTH AND SILENCING PROTEIN 1 TLS1 FAMILY MEMBER |
Lsat_s013.g0207.t1 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Lsat_s013.g0208.t1 | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE |
Lsat_s013.g0209.t1 | |
Lsat_s013.g0210.t1 | OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC |
Lsat_s013.g0211.t1 | GENE 7073-RELATED |
Lsat_s013.g0212.t1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Lsat_s013.g0213.t1 | DOPAMINE BETA HYDROXYLASE RELATED |
Lsat_s013.g0214.t1 | |
Lsat_s013.g0215.t1 | DIMETHYLANILINE MONOOXYGENASE |
Lsat_s013.g0216.t1 | |
Lsat_s013.g0217.t1 | |
Lsat_s013.g0218.t1 | DIMETHYLANILINE MONOOXYGENASE |
Lsat_s013.g0219.t1 | PEPTIDASE |
Lsat_s013.g0220.t1 | DIMETHYLANILINE MONOOXYGENASE |
Lsat_s013.g0221.t1 | |
Lsat_s013.g0222.t1 | |
Lsat_s013.g0223.t1 | |
Lsat_s013.g0224.t1 | |
Lsat_s013.g0225.t1 | |
Lsat_s013.g0226.t1 | |
Lsat_s013.g0227.t1 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Lsat_s013.g0228.t1 | |
Lsat_s013.g0229.t1 | |
Lsat_s013.g0230.t1 | |
Lsat_s013.g0231.t1 | |
Lsat_s013.g0232.t1 | ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7 |
Lsat_s013.g0233.t1 | |
Lsat_s013.g0234.t1 | |
Lsat_s013.g0235.t1 | |
Lsat_s013.g0236.t1 | BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER |
Lsat_s013.g0237.t1 | SI:CH211-189E2.2 |
Lsat_s013.g0238.t1 | EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN |
Lsat_s013.g0239.t1 | NUCLEOSIDE DIPHOSPHATE KINASE 7 |
Lsat_s013.g0240.t1 | |
Lsat_s013.g0241.t1 | |
Lsat_s013.g0242.t1 | CONTACTIN 5 |
Lsat_s013.g0243.t1 | BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER |
Lsat_s013.g0244.t1 | COLLAGEN ALPHA |
Lsat_s013.g0245.t1 | ARMADILLO-TYPE FOLD-RELATED |
Lsat_s013.g0246.t1 | BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER |
Lsat_s013.g0247.t1 | HISTONE-LYSINE N-METHYLTRANSFERASE SMYD |