About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s013.g0098.t1NF-KAPPA-B INHIBITOR ALPHA
Lsat_s013.g0099.t1CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 8
Lsat_s013.g0100.t1
Lsat_s013.g0101.t1
Lsat_s013.g0102.t1CELL FATE DETERMINING PROTEIN MAB21-RELATED
Lsat_s013.g0103.t1RIBONUCLEASE III
Lsat_s013.g0104.t1SELENOPROTEIN S
Lsat_s013.g0105.t1
Lsat_s013.g0106.t1SLEI FAMILY PROTEIN
Lsat_s013.g0107.t1
Lsat_s013.g0108.t1
Lsat_s013.g0109.t1
Lsat_s013.g0110.t1CATION-TRANSPORTING ATPASE-RELATED
Lsat_s013.g0111.t1WD40 REPEAT PROTEIN
Lsat_s013.g0112.t1
Lsat_s013.g0113.t1
Lsat_s013.g0114.t1
Lsat_s013.g0115.t1
Lsat_s013.g0116.t1HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
Lsat_s013.g0117.t1
Lsat_s013.g0118.t1
Lsat_s013.g0119.t1TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT MAPKAP1
Lsat_s013.g0120.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1
Lsat_s013.g0121.t1
Lsat_s013.g0122.t1
Lsat_s013.g0123.t1
Lsat_s013.g0124.t1
Lsat_s013.g0125.t1
Lsat_s013.g0126.t1
Lsat_s013.g0127.t1
Lsat_s013.g0128.t1
Lsat_s013.g0129.t1
Lsat_s013.g0130.t1
Lsat_s013.g0131.t1
Lsat_s013.g0132.t1ACETYLTRANSFERASE
Lsat_s013.g0133.t1
Lsat_s013.g0134.t1
Lsat_s013.g0135.t1
Lsat_s013.g0136.t1
Lsat_s013.g0137.t1
Lsat_s013.g0138.t1COLLAGEN
Lsat_s013.g0139.t1
Lsat_s013.g0140.t1
Lsat_s013.g0141.t1
Lsat_s013.g0142.t1
Lsat_s013.g0143.t1
Lsat_s013.g0144.t1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s013.g0145.t1
Lsat_s013.g0146.t1NUCLEAR RECEPTOR CO-REPRESSOR RELATED NCOR
Lsat_s013.g0147.t1
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