About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s243.g0001.t1
Lsat_s244.g0001.t1
Lsat_s244.g0002.t1RAB-GAP/TBC-RELATED
Lsat_s244.g0003.t1
Lsat_s245.g0001.t1
Lsat_s248.g0001.t1
Lsat_s251.g0001.t1
Lsat_s251.g0002.t1
Lsat_s252.g0001.t1
Lsat_s255.g0001.t1CABRIOLET.-RELATED
Lsat_s260.g0001.t1
Lsat_s263.g0001.t1
Lsat_s265.g0001.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s266.g0001.t1THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC
Lsat_s267.g0001.t1
Lsat_s270.g0001.t1
Lsat_s270.g0002.t1
Lsat_s271.g0001.t1
Lsat_s277.g0001.t1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Lsat_s278.g0001.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s283.g0001.t1DIMETHYLANILINE MONOOXYGENASE
Lsat_s290.g0001.t1
Lsat_s294.g0001.t1
Lsat_s297.g0001.t1NOTCH LIGAND FAMILY MEMBER
Lsat_s306.g0001.t1
Lsat_s308.g0001.t1
Lsat_s309.g0001.t1
Lsat_s312.g0001.t1-
Lsat_s313.g0001.t1
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