About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s170.g0001.t1
Lsat_s170.g0002.t1CRUMBS FAMILY MEMBER
Lsat_s170.g0003.t1
Lsat_s170.g0004.t1
Lsat_s170.g0005.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s170.g0006.t1
Lsat_s171.g0001.t1MIX-TYPE HOMEOBOX GENE 1-RELATED
Lsat_s171.g0002.t1
Lsat_s171.g0003.t1
Lsat_s171.g0004.t1
Lsat_s171.g0005.t1
Lsat_s171.g0006.t1
Lsat_s171.g0007.t1PHOSPHOLIPASE D - RELATED
Lsat_s171.g0008.t1CONSORTIN
Lsat_s172.g0001.t1
Lsat_s172.g0002.t1
Lsat_s172.g0003.t1
Lsat_s172.g0004.t1
Lsat_s172.g0005.t1TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE
Lsat_s172.g0006.t1ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
Lsat_s172.g0007.t1
Lsat_s173.g0001.t1
Lsat_s173.g0002.t1
Lsat_s173.g0003.t1
Lsat_s173.g0004.t1STANNIOCALCIN
Lsat_s173.g0005.t1
Lsat_s173.g0006.t1
Lsat_s173.g0007.t1FUKUTIN RELATED PROTEIN
Lsat_s173.g0008.t1
Lsat_s173.g0009.t1
Lsat_s173.g0010.t1
Lsat_s173.g0011.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s173.g0012.t1
Lsat_s173.g0013.t1
Lsat_s173.g0014.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s174.g0001.t1
Lsat_s174.g0002.t1ZINC FINGER AND SCAN DOMAIN-CONTAINING
Lsat_s174.g0003.t1
Lsat_s174.g0004.t1MUCIN 4-RELATED
Lsat_s174.g0005.t1
Lsat_s174.g0006.t1GLYCOSYLTRANSFERASE-LIKE 1
Lsat_s174.g0007.t1
Lsat_s174.g0008.t1
Lsat_s175.g0001.t1
Lsat_s175.g0002.t1
Lsat_s175.g0003.t1
Lsat_s175.g0004.t1
Lsat_s176.g0001.t1
Lsat_s176.g0002.t1SI:CH211-171H4.7-RELATED
Lsat_s176.g0003.t1SLEI FAMILY PROTEIN
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