About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s180.g0001.t1
Lsat_s180.g0002.t1
Lsat_s180.g0003.t1
Lsat_s180.g0004.t1MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
Lsat_s180.g0005.t1SWIM-TYPE DOMAIN-CONTAINING PROTEIN
Lsat_s180.g0006.t1
Lsat_s180.g0007.t1
Lsat_s180.g0008.t1
Lsat_s181.g0001.t1
Lsat_s181.g0002.t1
Lsat_s181.g0003.t1
Lsat_s181.g0004.t1
Lsat_s181.g0005.t1
Lsat_s182.g0001.t1-
Lsat_s182.g0002.t1MATING RESPONSE PROTEIN POI2
Lsat_s182.g0003.t1-
Lsat_s182.g0004.t1PROTEIN CBG26694
Lsat_s182.g0005.t1SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54
Lsat_s182.g0006.t1SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54
Lsat_s182.g0007.t1RGD1565685 PROTEIN
Lsat_s182.g0008.t1NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
Lsat_s183.g0001.t1
Lsat_s183.g0002.t1
Lsat_s183.g0003.t1
Lsat_s183.g0004.t1
Lsat_s184.g0001.t1
Lsat_s184.g0002.t1
Lsat_s184.g0003.t1
Lsat_s184.g0004.t1
Lsat_s184.g0005.t1
Lsat_s184.g0006.t1
Lsat_s185.g0001.t1
Lsat_s185.g0002.t1
Lsat_s185.g0003.t1
Lsat_s185.g0004.t1
Lsat_s185.g0005.t1
Lsat_s185.g0006.t1SENSOR KINASE-RELATED
Lsat_s185.g0007.t1IRE1-RELATED
Lsat_s185.g0008.t1
Lsat_s186.g0001.t1SET DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s187.g0001.t1
Lsat_s187.g0002.t1ACROSIN-RELATED
Lsat_s188.g0001.t1
Lsat_s188.g0002.t1
Lsat_s188.g0003.t1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Lsat_s192.g0001.t1
Lsat_s192.g0002.t1
Lsat_s192.g0003.t1INHIBITOR OF APOPTOSIS
Lsat_s192.g0004.t1SUPRABASAL-SPECIFIC PROTEIN SUPRABASIN
Lsat_s193.g0001.t1FORMIN-J
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