About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s211.g0004.t1
Lsat_s211.g0005.t1
Lsat_s211.g0006.t1
Lsat_s211.g0007.t1
Lsat_s212.g0001.t1
Lsat_s212.g0002.t1
Lsat_s212.g0003.t1
Lsat_s212.g0004.t1
Lsat_s212.g0005.t1
Lsat_s213.g0001.t1
Lsat_s214.g0001.t1
Lsat_s214.g0002.t1SWIM-TYPE DOMAIN-CONTAINING PROTEIN
Lsat_s214.g0003.t1
Lsat_s214.g0004.t1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Lsat_s215.g0001.t1
Lsat_s215.g0002.t1
Lsat_s216.g0001.t1
Lsat_s216.g0002.t1
Lsat_s217.g0001.t1
Lsat_s217.g0002.t1
Lsat_s217.g0003.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s217.g0004.t1
Lsat_s218.g0001.t1PROTEIN DISPATCHED-RELATED
Lsat_s220.g0001.t1
Lsat_s220.g0002.t1
Lsat_s221.g0001.t1
Lsat_s222.g0001.t1
Lsat_s223.g0001.t1SET DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s223.g0002.t1
Lsat_s224.g0001.t1
Lsat_s224.g0002.t1MUCIN-22
Lsat_s225.g0001.t1
Lsat_s226.g0001.t1
Lsat_s226.g0002.t1
Lsat_s226.g0003.t1ANTIGEN BSP, PUTATIVE-RELATED
Lsat_s227.g0001.t1TRANSMEMBRANE PROTEASE SERINE
Lsat_s228.g0001.t1
Lsat_s230.g0001.t1
Lsat_s232.g0001.t1
Lsat_s234.g0001.t1URIDINE PHOSPHORYLASE
Lsat_s236.g0001.t1
Lsat_s237.g0001.t1
Lsat_s237.g0002.t1
Lsat_s238.g0001.t1
Lsat_s238.g0002.t1
Lsat_s238.g0003.t1
Lsat_s240.g0001.t1
Lsat_s241.g0001.t1
Lsat_s241.g0002.t1
Lsat_s241.g0003.t1
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