About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s193.g0002.t1HOMEOBOX PROTEIN ARISTALESS
Lsat_s193.g0003.t1
Lsat_s193.g0004.t1
Lsat_s193.g0005.t1
Lsat_s193.g0006.t1HOMEOBOX PROTEIN ORTHOPEDIA
Lsat_s194.g0001.t1DNA POLYMERASE CATALYTIC SUBUNIT
Lsat_s194.g0002.t1
Lsat_s194.g0003.t1
Lsat_s194.g0004.t1
Lsat_s196.g0001.t1
Lsat_s196.g0002.t1
Lsat_s196.g0003.t1
Lsat_s196.g0004.t1
Lsat_s196.g0005.t1
Lsat_s198.g0001.t1ADP-RIBOSYLGLYCOHYDROLASE
Lsat_s198.g0002.t1ADP-RIBOSYLGLYCOHYDROLASE
Lsat_s198.g0003.t1ADP-RIBOSYLGLYCOHYDROLASE
Lsat_s198.g0004.t1ADP-RIBOSYLGLYCOHYDROLASE
Lsat_s199.g0001.t1
Lsat_s199.g0002.t1
Lsat_s201.g0001.t1TENASCIN
Lsat_s201.g0002.t1HELICASE
Lsat_s202.g0001.t1
Lsat_s202.g0002.t1-
Lsat_s202.g0003.t1
Lsat_s202.g0004.t1
Lsat_s203.g0001.t1
Lsat_s203.g0002.t1
Lsat_s203.g0003.t1
Lsat_s203.g0004.t1
Lsat_s203.g0005.t1
Lsat_s203.g0006.t1
Lsat_s203.g0007.t1
Lsat_s203.g0008.t1
Lsat_s203.g0009.t1
Lsat_s203.g0010.t1
Lsat_s204.g0001.t1RAN GTPASE-ACTIVATING PROTEIN 1
Lsat_s204.g0002.t1
Lsat_s205.g0001.t1YALI0E18722P
Lsat_s205.g0002.t1
Lsat_s205.g0003.t1
Lsat_s206.g0001.t1
Lsat_s206.g0002.t1
Lsat_s208.g0001.t1
Lsat_s208.g0002.t1BETA1,3-GALACTOSYLTRANSFERASE
Lsat_s209.g0001.t1GLYCOSYLTRANSFERASE-LIKE 1
Lsat_s210.g0001.t1
Lsat_s211.g0001.t1
Lsat_s211.g0002.t1
Lsat_s211.g0003.t1
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