About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s013.g0348.t1UNCHARACTERIZED
Lsat_s013.g0349.t1ANNEXIN
Lsat_s013.g0350.t1
Lsat_s013.g0351.t1
Lsat_s013.g0352.t1
Lsat_s013.g0353.t1
Lsat_s013.g0354.t1SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED
Lsat_s013.g0355.t1CRUMBS FAMILY MEMBER
Lsat_s013.g0356.t1G9A, ISOFORM B
Lsat_s013.g0357.t1
Lsat_s013.g0358.t1ENDONUCLEASE RELATED
Lsat_s013.g0359.t1TRANSCRIPTION INITIATION FACTOR IIB-RELATED
Lsat_s013.g0360.t1
Lsat_s013.g0361.t1BETA1,3-GALACTOSYLTRANSFERASE
Lsat_s013.g0362.t1PNAS-RELATED
Lsat_s013.g0363.t1SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
Lsat_s013.g0364.t1
Lsat_s013.g0365.t1PHOSPHATE-BINDING PROTEIN PSTS
Lsat_s013.g0366.t1PHOSPHATE-BINDING PROTEIN PSTS
Lsat_s013.g0367.t1
Lsat_s013.g0368.t1PHOSPHATE-BINDING PROTEIN PSTS
Lsat_s013.g0369.t1COAGULATION FACTOR
Lsat_s013.g0370.t1
Lsat_s013.g0371.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s013.g0372.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s013.g0373.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s013.g0374.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s013.g0375.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s013.g0376.t1
Lsat_s013.g0377.t1
Lsat_s013.g0378.t1
Lsat_s013.g0379.t1
Lsat_s013.g0380.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s013.g0381.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s013.g0382.t1
Lsat_s013.g0383.t1
Lsat_s013.g0384.t1UNNAMED PRODUCT
Lsat_s013.g0385.t1
Lsat_s013.g0386.t1GLYCOSYLTRANSFERASE 14 FAMILY MEMBER
Lsat_s013.g0387.t1
Lsat_s013.g0388.t1SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT
Lsat_s013.g0389.t1CYSTATHIONINE BETA-SYNTHASE
Lsat_s013.g0390.t1CYSTATHIONINE BETA-SYNTHASE
Lsat_s013.g0391.t1CYSTATHIONINE BETA-SYNTHASE
Lsat_s013.g0392.t1CYSTATHIONINE BETA-SYNTHASE
Lsat_s013.g0393.t1GUANINE NUCLEOTIDE EXCHANGE FACTOR
Lsat_s013.g0394.t1COLLAGEN ALPHA
Lsat_s013.g0395.t1METALLOPROTEASE TLDD
Lsat_s013.g0396.t1
Lsat_s013.g0397.t1F-BOX/WD REPEAT-CONTAINING PROTEIN 5
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