Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s013.g0348.t1 | UNCHARACTERIZED |
Lsat_s013.g0349.t1 | ANNEXIN |
Lsat_s013.g0350.t1 | |
Lsat_s013.g0351.t1 | |
Lsat_s013.g0352.t1 | |
Lsat_s013.g0353.t1 | |
Lsat_s013.g0354.t1 | SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED |
Lsat_s013.g0355.t1 | CRUMBS FAMILY MEMBER |
Lsat_s013.g0356.t1 | G9A, ISOFORM B |
Lsat_s013.g0357.t1 | |
Lsat_s013.g0358.t1 | ENDONUCLEASE RELATED |
Lsat_s013.g0359.t1 | TRANSCRIPTION INITIATION FACTOR IIB-RELATED |
Lsat_s013.g0360.t1 | |
Lsat_s013.g0361.t1 | BETA1,3-GALACTOSYLTRANSFERASE |
Lsat_s013.g0362.t1 | PNAS-RELATED |
Lsat_s013.g0363.t1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
Lsat_s013.g0364.t1 | |
Lsat_s013.g0365.t1 | PHOSPHATE-BINDING PROTEIN PSTS |
Lsat_s013.g0366.t1 | PHOSPHATE-BINDING PROTEIN PSTS |
Lsat_s013.g0367.t1 | |
Lsat_s013.g0368.t1 | PHOSPHATE-BINDING PROTEIN PSTS |
Lsat_s013.g0369.t1 | COAGULATION FACTOR |
Lsat_s013.g0370.t1 | |
Lsat_s013.g0371.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s013.g0372.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s013.g0373.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s013.g0374.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s013.g0375.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s013.g0376.t1 | |
Lsat_s013.g0377.t1 | |
Lsat_s013.g0378.t1 | |
Lsat_s013.g0379.t1 | |
Lsat_s013.g0380.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s013.g0381.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s013.g0382.t1 | |
Lsat_s013.g0383.t1 | |
Lsat_s013.g0384.t1 | UNNAMED PRODUCT |
Lsat_s013.g0385.t1 | |
Lsat_s013.g0386.t1 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
Lsat_s013.g0387.t1 | |
Lsat_s013.g0388.t1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT |
Lsat_s013.g0389.t1 | CYSTATHIONINE BETA-SYNTHASE |
Lsat_s013.g0390.t1 | CYSTATHIONINE BETA-SYNTHASE |
Lsat_s013.g0391.t1 | CYSTATHIONINE BETA-SYNTHASE |
Lsat_s013.g0392.t1 | CYSTATHIONINE BETA-SYNTHASE |
Lsat_s013.g0393.t1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
Lsat_s013.g0394.t1 | COLLAGEN ALPHA |
Lsat_s013.g0395.t1 | METALLOPROTEASE TLDD |
Lsat_s013.g0396.t1 | |
Lsat_s013.g0397.t1 | F-BOX/WD REPEAT-CONTAINING PROTEIN 5 |