Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s013.g0398.t1 | E3 UBIQUITIN-PROTEIN LIGASE PPP1R11-RELATED |
Lsat_s013.g0399.t1 | RAPSYN-RELATED |
Lsat_s013.g0400.t1 | TORSIN |
Lsat_s013.g0401.t1 | |
Lsat_s013.g0402.t1 | |
Lsat_s013.g0403.t1 | - |
Lsat_s013.g0404.t1 | PROTEIN CBG17025 |
Lsat_s013.g0405.t1 | ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED |
Lsat_s013.g0406.t1 | RHO FAMILY GTPASE |
Lsat_s013.g0407.t1 | MUCIN-17 |
Lsat_s013.g0408.t1 | TETRASPANIN |
Lsat_s013.g0409.t1 | |
Lsat_s013.g0410.t1 | SOLUTE CARRIER FAMILY 17 |
Lsat_s013.g0411.t1 | ALZHEIMER'S DISEASE BETA-AMYLOID RELATED |
Lsat_s013.g0412.t1 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKE |
Lsat_s013.g0413.t1 | WD-REPEAT PROTEIN BING4 |
Lsat_s013.g0414.t1 | |
Lsat_s013.g0415.t1 | STABILIZER OF AXONEMAL MICROTUBULES 2 |
Lsat_s013.g0416.t1 | TRANSFERASE, PUTATIVE-RELATED |
Lsat_s013.g0417.t1 | FMRFAMIDE RECEPTOR-RELATED |
Lsat_s013.g0418.t1 | |
Lsat_s013.g0419.t1 | |
Lsat_s013.g0420.t1 | UNCHARACTERIZED |
Lsat_s013.g0421.t1 | NKAP DOMAIN-CONTAINING 1 |
Lsat_s013.g0422.t1 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51 |
Lsat_s013.g0423.t1 | PRENYLATED RAB ACCEPTOR 1-RELATED |
Lsat_s013.g0424.t1 | |
Lsat_s013.g0425.t1 | |
Lsat_s013.g0426.t1 | |
Lsat_s013.g0427.t1 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED |
Lsat_s013.g0428.t1 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Lsat_s013.g0429.t1 | |
Lsat_s013.g0430.t1 | PROTEIN CBG10425 |
Lsat_s013.g0431.t1 | CARBOHYDRATE SULFOTRANSFERASE |
Lsat_s013.g0432.t1 | |
Lsat_s013.g0433.t1 | |
Lsat_s013.g0434.t1 | PROTEIN SIDEKICK |
Lsat_s013.g0435.t1 | |
Lsat_s013.g0436.t1 | |
Lsat_s013.g0437.t1 | NEPHRIN |
Lsat_s013.g0438.t1 | |
Lsat_s013.g0439.t1 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Lsat_s013.g0440.t1 | |
Lsat_s013.g0441.t1 | NEGATIVE ELONGATION FACTOR COMPLEX MEMBER B |
Lsat_s013.g0442.t1 | ANAPHASE-PROMOTING COMPLEX SUBUNIT 5 |
Lsat_s013.g0443.t1 | GOLGIN SUBFAMILY A MEMBER-RELATED |
Lsat_s013.g0444.t1 | NEPHRIN |
Lsat_s013.g0445.t1 | |
Lsat_s013.g0446.t1 | DIMETHYLANILINE MONOOXYGENASE |
Lsat_s013.g0447.t1 | DIMETHYLANILINE MONOOXYGENASE |