About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s013.g0398.t1E3 UBIQUITIN-PROTEIN LIGASE PPP1R11-RELATED
Lsat_s013.g0399.t1RAPSYN-RELATED
Lsat_s013.g0400.t1TORSIN
Lsat_s013.g0401.t1
Lsat_s013.g0402.t1
Lsat_s013.g0403.t1-
Lsat_s013.g0404.t1PROTEIN CBG17025
Lsat_s013.g0405.t1ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED
Lsat_s013.g0406.t1RHO FAMILY GTPASE
Lsat_s013.g0407.t1MUCIN-17
Lsat_s013.g0408.t1TETRASPANIN
Lsat_s013.g0409.t1
Lsat_s013.g0410.t1SOLUTE CARRIER FAMILY 17
Lsat_s013.g0411.t1ALZHEIMER'S DISEASE BETA-AMYLOID RELATED
Lsat_s013.g0412.t1CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKE
Lsat_s013.g0413.t1WD-REPEAT PROTEIN BING4
Lsat_s013.g0414.t1
Lsat_s013.g0415.t1STABILIZER OF AXONEMAL MICROTUBULES 2
Lsat_s013.g0416.t1TRANSFERASE, PUTATIVE-RELATED
Lsat_s013.g0417.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s013.g0418.t1
Lsat_s013.g0419.t1
Lsat_s013.g0420.t1UNCHARACTERIZED
Lsat_s013.g0421.t1NKAP DOMAIN-CONTAINING 1
Lsat_s013.g0422.t1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51
Lsat_s013.g0423.t1PRENYLATED RAB ACCEPTOR 1-RELATED
Lsat_s013.g0424.t1
Lsat_s013.g0425.t1
Lsat_s013.g0426.t1
Lsat_s013.g0427.t1INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s013.g0428.t1INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Lsat_s013.g0429.t1
Lsat_s013.g0430.t1PROTEIN CBG10425
Lsat_s013.g0431.t1CARBOHYDRATE SULFOTRANSFERASE
Lsat_s013.g0432.t1
Lsat_s013.g0433.t1
Lsat_s013.g0434.t1PROTEIN SIDEKICK
Lsat_s013.g0435.t1
Lsat_s013.g0436.t1
Lsat_s013.g0437.t1NEPHRIN
Lsat_s013.g0438.t1
Lsat_s013.g0439.t1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Lsat_s013.g0440.t1
Lsat_s013.g0441.t1NEGATIVE ELONGATION FACTOR COMPLEX MEMBER B
Lsat_s013.g0442.t1ANAPHASE-PROMOTING COMPLEX SUBUNIT 5
Lsat_s013.g0443.t1GOLGIN SUBFAMILY A MEMBER-RELATED
Lsat_s013.g0444.t1NEPHRIN
Lsat_s013.g0445.t1
Lsat_s013.g0446.t1DIMETHYLANILINE MONOOXYGENASE
Lsat_s013.g0447.t1DIMETHYLANILINE MONOOXYGENASE
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