About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s013.g0298.t1KNIRPS-RELATED PROTEIN-RELATED
Lsat_s013.g0299.t1RING ZINC FINGER PROTEIN
Lsat_s013.g0300.t1P25 ALPHA-RELATED
Lsat_s013.g0301.t1
Lsat_s013.g0302.t1ATP-BINDING TRANSPORT PROTEIN-RELATED
Lsat_s013.g0303.t1
Lsat_s013.g0304.t1E3 UBIQUITIN-PROTEIN LIGASE COP1
Lsat_s013.g0305.t1SUCCINATE DEHYDROGENASE
Lsat_s013.g0306.t1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Lsat_s013.g0307.t1PALMITOYLTRANSFERASE ZDHHC16
Lsat_s013.g0308.t1
Lsat_s013.g0309.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s013.g0310.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s013.g0311.t1
Lsat_s013.g0312.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s013.g0313.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s013.g0314.t1LIM/HOMEOBOX PROTEIN LHX
Lsat_s013.g0315.t1GLR0591 PROTEIN
Lsat_s013.g0316.t1
Lsat_s013.g0317.t1
Lsat_s013.g0318.t1GLR0591 PROTEIN
Lsat_s013.g0319.t1NEUROPEPTIDES RECEPTOR
Lsat_s013.g0320.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s013.g0321.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s013.g0322.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s013.g0323.t1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s013.g0324.t1GLR0591 PROTEIN
Lsat_s013.g0325.t1
Lsat_s013.g0326.t1DNA REPAIR PROTEIN XRCC2
Lsat_s013.g0327.t1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR
Lsat_s013.g0328.t1
Lsat_s013.g0329.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s013.g0330.t1RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Lsat_s013.g0331.t1
Lsat_s013.g0332.t1
Lsat_s013.g0333.t1
Lsat_s013.g0334.t1LIM/HOMEOBOX PROTEIN LHX
Lsat_s013.g0335.t1
Lsat_s013.g0336.t1LIM/HOMEOBOX PROTEIN LHX
Lsat_s013.g0337.t1
Lsat_s013.g0338.t1LIM/HOMEOBOX PROTEIN LHX
Lsat_s013.g0339.t1
Lsat_s013.g0340.t1NECTIN-RELATED
Lsat_s013.g0341.t1
Lsat_s013.g0342.t1REGULATOR OF G-PROTEIN SIGNALING 3
Lsat_s013.g0343.t1NUCLEAR HORMONE RECEPTOR
Lsat_s013.g0344.t1
Lsat_s013.g0345.t1MITOCHONDRIAL RIBOSOMAL PROTEIN L41
Lsat_s013.g0346.t1NHL REPEAT-CONTAINING PROTEIN-RELATED
Lsat_s013.g0347.t1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
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