Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s014.g0258.t1 | PEPTIDOGLYCAN RECOGNITION PROTEIN |
Lsat_s014.g0259.t1 | |
Lsat_s014.g0260.t1 | PEPTIDOGLYCAN RECOGNITION PROTEIN |
Lsat_s014.g0261.t1 | |
Lsat_s014.g0262.t1 | SPLICING FACTOR 3B, SUBUNIT 1-RELATED |
Lsat_s014.g0263.t1 | SPERM PROTEIN HOMOLOG |
Lsat_s014.g0264.t1 | |
Lsat_s014.g0265.t1 | SPERM PROTEIN HOMOLOG |
Lsat_s014.g0266.t1 | HEPARAN SULFATE SULFOTRANSFERASE |
Lsat_s014.g0267.t1 | |
Lsat_s014.g0268.t1 | |
Lsat_s014.g0269.t1 | |
Lsat_s014.g0270.t1 | |
Lsat_s014.g0271.t1 | CELL DIVISION PROTEIN KINASE |
Lsat_s014.g0272.t1 | 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1 |
Lsat_s014.g0273.t1 | GROWTH FACTOR RECEPTOR-BOUND PROTEIN |
Lsat_s014.g0274.t1 | CARBONYL REDUCTASE 1-RELATED |
Lsat_s014.g0275.t1 | CARBONYL REDUCTASE 1-RELATED |
Lsat_s014.g0276.t1 | ACTIVATOR OF S-PHASE KINASE-RELATED |
Lsat_s014.g0277.t1 | ARYLSULFATASE FAMILY MEMBER |
Lsat_s014.g0278.t1 | |
Lsat_s014.g0279.t1 | |
Lsat_s014.g0280.t1 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 1 |
Lsat_s014.g0281.t1 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
Lsat_s014.g0282.t1 | GATOR COMPLEX PROTEIN WDR24 |
Lsat_s014.g0283.t1 | DEATH DOMAIN-CONTAINING PROTEIN CRADD |
Lsat_s014.g0284.t1 | GATOR COMPLEX PROTEIN WDR24 |
Lsat_s014.g0285.t1 | |
Lsat_s014.g0286.t1 | ACID PHOSPHATASE-RELATED |
Lsat_s014.g0287.t1 | ACID PHOSPHATASE-RELATED |
Lsat_s014.g0288.t1 | ACID PHOSPHATASE-RELATED |
Lsat_s014.g0289.t1 | ACID PHOSPHATASE-RELATED |
Lsat_s014.g0290.t1 | ACID PHOSPHATASE-RELATED |
Lsat_s014.g0291.t1 | TRANSFERASE, PUTATIVE-RELATED |
Lsat_s014.g0292.t1 | |
Lsat_s014.g0293.t1 | TRANSFERASE, PUTATIVE-RELATED |
Lsat_s014.g0294.t1 | TRANSFERASE, PUTATIVE-RELATED |
Lsat_s014.g0295.t1 | TUBULIN POLYGLUTAMYLASE |
Lsat_s014.g0296.t1 | CDGSH IRON SULFUR DOMAIN PROTEIN HOMOLOG |
Lsat_s014.g0297.t1 | SPERM-ASSOCIATED ANTIGEN 6 ARMADILLO REPEAT-CONTAINING |
Lsat_s014.g0298.t1 | FORMIN-LIKE PROTEIN |
Lsat_s014.g0299.t1 | PROTEIN CBG26694 |
Lsat_s014.g0300.t1 | |
Lsat_s014.g0301.t1 | INTELECTIN |
Lsat_s014.g0302.t1 | |
Lsat_s014.g0303.t1 | |
Lsat_s014.g0304.t1 | |
Lsat_s014.g0305.t1 | |
Lsat_s014.g0306.t1 | |
Lsat_s014.g0307.t1 |