Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s015.g0127.t1 | CEREBRAL CAVERNOUS MALFORMATIONS PROTEIN 2 HOMOLOG |
Lsat_s015.g0128.t1 | INTEGRIN BETA-1-BINDING PROTEIN 1 |
Lsat_s015.g0129.t1 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
Lsat_s015.g0130.t1 | |
Lsat_s015.g0131.t1 | LEUCINE RICH REPEAT FAMILY PROTEIN |
Lsat_s015.g0132.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s015.g0133.t1 | TRANSCRIPTION FACTOR CP2 |
Lsat_s015.g0134.t1 | |
Lsat_s015.g0135.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s015.g0136.t1 | |
Lsat_s015.g0137.t1 | |
Lsat_s015.g0138.t1 | |
Lsat_s015.g0139.t1 | |
Lsat_s015.g0140.t1 | |
Lsat_s015.g0141.t1 | |
Lsat_s015.g0142.t1 | |
Lsat_s015.g0143.t1 | |
Lsat_s015.g0144.t1 | |
Lsat_s015.g0145.t1 | REGULATOR OF G PROTEIN SIGNALING |
Lsat_s015.g0146.t1 | |
Lsat_s015.g0147.t1 | M-AAA PROTEASE-INTERACTING PROTEIN 1, MITOCHONDRIAL |
Lsat_s015.g0148.t1 | UNCHARACTERIZED |
Lsat_s015.g0149.t1 | ARMADILLO-LIKE HELICAL DOMAIN CONTAINING PROTEIN 1 |
Lsat_s015.g0150.t1 | |
Lsat_s015.g0151.t1 | VITELLOGENIN-RELATED |
Lsat_s015.g0152.t1 | SYNAPTONEMAL COMPLEX CENTRAL ELEMENT PROTEIN 2 |
Lsat_s015.g0153.t1 | INTEGRAL MEMBRANE PROTEIN GPR177 |
Lsat_s015.g0154.t1 | |
Lsat_s015.g0155.t1 | N-ACETYLTRANSFERASE ECO |
Lsat_s015.g0156.t1 | DUF814-RELATED |
Lsat_s015.g0157.t1 | STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 15 |
Lsat_s015.g0158.t1 | ODD-SKIPPED - RELATED |
Lsat_s015.g0159.t1 | |
Lsat_s015.g0160.t1 | |
Lsat_s015.g0161.t1 | |
Lsat_s015.g0162.t1 | |
Lsat_s015.g0163.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s015.g0164.t1 | PROTEASE M1 ZINC METALLOPROTEASE |
Lsat_s015.g0165.t1 | PROTEASE M1 ZINC METALLOPROTEASE |
Lsat_s015.g0166.t1 | |
Lsat_s015.g0167.t1 | DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX |
Lsat_s015.g0168.t1 | RNA 3' TERMINAL PHOSPHATE CYCLASE |
Lsat_s015.g0169.t1 | GROWTH ARREST AND DNA DAMAGE-INDUCIBLE PROTEIN GADD45 |
Lsat_s015.g0170.t1 | |
Lsat_s015.g0171.t1 | |
Lsat_s015.g0172.t1 | GUANINE NUCLEOTIDE-BINDING PROTEIN GAMMA SUBUNIT |
Lsat_s015.g0173.t1 | |
Lsat_s015.g0174.t1 | UNCHARACTERIZED |
Lsat_s015.g0175.t1 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
Lsat_s015.g0176.t1 |