About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s015.g0427.t1PROTEIN DISPATCHED-RELATED
Lsat_s015.g0428.t1PROTEIN DISPATCHED-RELATED
Lsat_s015.g0429.t1
Lsat_s015.g0430.t1PROTEIN DISPATCHED-RELATED
Lsat_s015.g0431.t1PROTEIN KIAA0494
Lsat_s015.g0432.t1
Lsat_s015.g0433.t1ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN
Lsat_s015.g0434.t13'-5' EXONUCLEASE ERI1-RELATED
Lsat_s015.g0435.t1RGS-GAIP INTERACTING PROTEIN GIPC
Lsat_s015.g0436.t1MYELIN TRANSCRIPTION FACTOR 1-RELATED
Lsat_s015.g0437.t1WD-REPEAT PROTEIN
Lsat_s015.g0438.t1D-ALANYL-D-ALANINE CARBOXYPEPTIDASE
Lsat_s015.g0439.t1ZINC FINGERS AND HOMEOBOXES PROTEIN 1, ISOFORM 2
Lsat_s015.g0440.t1DNAJ HOMOLOG SUBFAMILY C MEMBER 21
Lsat_s015.g0441.t1
Lsat_s015.g0442.t1RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Lsat_s015.g0443.t1MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1
Lsat_s015.g0444.t1TRANSMEMBRANE PROTEIN 234
Lsat_s015.g0445.t1DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER
Lsat_s015.g0446.t1ENOYL-COA HYDRATASE-RELATED
Lsat_s015.g0447.t1TRANSMEMBRANE PROTEIN 214
Lsat_s015.g0448.t1TATD FAMILY DEOXYRIBONUCLEASE
Lsat_s015.g0449.t1
Lsat_s015.g0450.t1
Lsat_s015.g0451.t1
Lsat_s015.g0452.t1
Lsat_s015.g0453.t1PROFILIN
Lsat_s016.g0001.t1
Lsat_s016.g0002.t1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27
Lsat_s016.g0003.t1
Lsat_s016.g0004.t1
Lsat_s016.g0005.t1
Lsat_s016.g0006.t1
Lsat_s016.g0007.t1G PROTEIN-COUPLED RECEPTOR
Lsat_s016.g0008.t1
Lsat_s016.g0009.t1BLR2807 PROTEIN
Lsat_s016.g0010.t1
Lsat_s016.g0011.t1IMMUNOGLOBULIN
Lsat_s016.g0012.t1
Lsat_s016.g0013.t1
Lsat_s016.g0014.t1CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 19
Lsat_s016.g0015.t1
Lsat_s016.g0016.t1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s016.g0017.t1NMDA RECEPTOR SYNAPTONUCLEAR SIGNALING AND NEURONAL MIGRATION FACTOR
Lsat_s016.g0018.t1
Lsat_s016.g0019.t1
Lsat_s016.g0020.t1
Lsat_s016.g0021.t1T-BOX PROTEIN-RELATED
Lsat_s016.g0022.t1
Lsat_s016.g0023.t1T-BOX PROTEIN-RELATED
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